Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq6473 125 4e-24 seq10513 122 5e-23 seq6090 118 6e-22 seq10654 113 2e-20 seq6435 113 2e-20 seq3128 111 8e-20 seq15001 109 3e-19 seq9284 109 3e-19 seq5206 109 3e-19 seq3714 109 3e-19 seq6827 93.3 2e-14 >seq6473 Length=2876264 Score = 125 bits (138), Expect = 4e-24 Identities = 91/106 (86%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATT-----GGCCCATGAAAGGATCGAACCTTCGAC 11483 ||||| |||||| |||||||| ||||| |||||||| |||||||||| |||| Sbjct 1399544 AAATAATGAATTATTAAAAAATAAAATTAATTTGGCCCATGGGGGGATCGAACCCACGAC 1399603 Query 11484 CTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1399604 CTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 1399649 Score = 113 bits (124), Expect = 2e-20 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAA-----TTGGCCCATGAAAGGATCGAACCTTCGAC 11483 ||||| |||||| |||||||| ||| |||||||||| |||||||||| |||| Sbjct 1399098 AAATAATGAATTATTAAAAAATAAAAATAATTTGGCCCATGGGGGGATCGAACCCACGAC 1399157 Query 11484 CTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||| | ||||||||| ||||||| Sbjct 1399158 CTTCGCGTTATTAGCACGACGCTCTACCAAACTGAGCTCATGGGCC 1399203 >seq10513 Length=10397 Score = 122 bits (134), Expect = 5e-23 Identities = 97/117 (83%), Gaps = 9/117 (8%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAA-----TTGGCCCATGAAAGGATCGAACCTTCGAC 11483 ||||| || ||| |||||||| ||| |||||||||| |||||||||| |||| Sbjct 1092 AAATAATGACTTATTAAAAAATAAAAGTTATTTGGCCCATGGGGGGATCGAACCCACGAC 1033 Query 11484 CTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGATTG 11540 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1032 CTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC----ACGATTG 980 Score = 118 bits (130), Expect = 6e-22 Identities = 80/89 (90%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| || |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 1520 AACAAAAAAT-AATTTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 1462 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 1461 GACGCTCTAACCAACTGAGCTAATGGGCC 1433 >seq6090 Length=11297375 Score = 118 bits (130), Expect = 6e-22 Identities = 80/89 (90%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 7683875 AATAAAAAAG-AAAGTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 7683933 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 7683934 GACGCTCTAACCAACTGAGCTAATGGGCC 7683962 >seq10654 Length=9694 Score = 113 bits (124), Expect = 2e-20 Identities = 77/86 (90%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 4082 AAAAAATTTA-TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 4140 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 4141 GCTCTAACCAACTGAGCTAATGGGCC 4166 >seq6435 Length=4949621 Score = 113 bits (124), Expect = 2e-20 Identities = 83/97 (86%), Gaps = 4/97 (4%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAA----TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTT 11492 || |||||| |||| || |||||||||| |||||||||| ||||||||||||| Sbjct 3643921 AAATAATAAGAAATGTAAAACTTTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTT 3643862 Query 11493 ATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||| |||||||||||||||||||| Sbjct 3643861 ATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 3643825 Score = 113 bits (124), Expect = 2e-20 Identities = 80/92 (87%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTG---GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 || |||||| |||||| ||||||| |||||||||| |||||||||||||||||| Sbjct 3730197 AAAAAAAAACTAAATTGCTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAG 3730256 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| |||||||||||||||||||| Sbjct 3730257 CACGACGCTCTAACCAACTGAGCTAATGGGCC 3730288 Score = 109 bits (120), Expect = 3e-19 Identities = 77/88 (88%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 11445 AAAAATCAAATTG---GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||| |||||| ||||||| |||||||||| |||||||||||||||||||||| Sbjct 3645737 AAAAAAAAAATTGCTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACG 3645678 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 3645677 ACGCTCTAACCAACTGAGCTAATGGGCC 3645650 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 3647333 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 3647274 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 3647273 TGAGCTAATGGGCC 3647260 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 3728659 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 3728718 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 3728719 TGAGCTAATGGGCC 3728732 >seq3128 Length=1593025 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1198476 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1198535 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 1198536 CTGAGCTAATGGGCC 1198550 Score = 93.3 bits (102), Expect = 2e-14 Identities = 58/62 (94%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 1205536 GGATCGAACCCACGACCTTCGCGTTATTAGCAC-ACGCTCTGACCAACTGAGCTAATGGG 1205594 Query 11528 CC 11529 || Sbjct 1205595 CC 1205596 >seq15001 Length=4984484 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 4729844 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 4729785 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 4729784 TGAGCTAATGGGCC 4729771 >seq9284 Length=2599826 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1211230 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1211289 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 1211290 TGAGCTAATGGGCC 1211303 >seq5206 Length=777674 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 264850 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 264909 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 264910 TGAGCTAATGGGCC 264923 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 265297 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 265356 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 265357 TGAGCTAATGGGCC 265370 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 265761 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 265820 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 265821 TGAGCTAATGGGCC 265834 Score = 100 bits (110), Expect = 1e-16 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 264416 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGG 264475 Query 11528 CC 11529 || Sbjct 264476 CC 264477 >seq3714 Length=7313949 Score = 109 bits (120), Expect = 3e-19 Identities = 79/92 (86%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||| ||||| | | ||||||||| |||||||||| |||||||||||||||||| Sbjct 5462673 ATTATCAAAAAGTTACGCTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAG 5462732 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| |||||||||||||||||||| Sbjct 5462733 CACGACGCTCTAACCAACTGAGCTAATGGGCC 5462764 >seq6827 Length=2043836 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| |||| ||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct 1210892 TGGCTCATGGGAGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAAGCAAC 1210833 Query 11516 TGAGCTAATGGGCCG 11530 ||||||| || ||| Sbjct 1210832 TGAGCTATCGGCCCG 1210818 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261438510585508