Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq4472 147 2e-30 seq435 111 1e-19 seq13703 100 3e-16 >seq4472 Length=7509737 Score = 147 bits (162), Expect = 2e-30 Identities = 179/242 (74%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||||||| | ||| || | |||||||||||||| ||||| | Sbjct 667566 AAAAATTTGCATTCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGAT 667625 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||||||||| | ||| ||| | ||| || |||||||| ||| |||| ||||| | Sbjct 667626 GTTATAATC--TGATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGC 667683 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || || || || |||||||| ||||| || | ||||||||||| || | | ||| Sbjct 667684 TGTTGGTCAGGTGGAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTG 667743 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||| | || || || | ||||||||||||||||| | |||||| ||||| || ||| Sbjct 667744 TCACTAGGCTCAACTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGC 667803 Query 95006 AT 95007 || Sbjct 667804 AT 667805 Score = 143 bits (158), Expect = 2e-29 Identities = 178/242 (74%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || ||||| || | |||||||||||| | ||| ||||| ||||| | Sbjct 667794 AAAAATTTGCATACCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAAT 667853 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 |||||| | || | || || || ||| || |||||||| || ||||||| | ||| Sbjct 667854 GTTATAGT--CTGAAAGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTT 667911 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 |||||||| |||||||| ||||| ||||| | ||||| || || ||| | | ||| Sbjct 667912 TGCTGATCAGGAGGAATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTA 667971 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||| | || || || | ||||| ||||| |||||||| ||||| || || |||||| Sbjct 667972 TCACTAGGCTCTACTTCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGC 668031 Query 95006 AT 95007 || Sbjct 668032 AT 668033 Score = 129 bits (142), Expect = 5e-25 Identities = 175/242 (72%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||||| || | || | ||||| |||||||| ||||| || || | Sbjct 668250 AAAAATCTGCATACCTCCCCTTAGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTAT 668309 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||||||||| | | ||||| | ||| || ||||| || || |||| ||||| | | Sbjct 668310 GTTATAATC--TGAAAGTGTACGGCCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGT 668367 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||| || || ||||||||||||||||| | ||||| ||||| || | | ||| Sbjct 668368 TGCTGGTCAGGGGGAATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTG 668427 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||| | | || || || | || ||||| || ||||| | |||||| |||||||||||| Sbjct 668428 TCACTGGGTTCAACTTCCAAGGTTATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGC 668487 Query 95006 AT 95007 || Sbjct 668488 AT 668489 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||| | || ||||||||| | |||||||| ||||| | |||||| || Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| ||| || || |||||||| |||| || | | ||||||||| || ||| Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGAC 94959 |||||||||||||| | ||||| || || || | | || ||| | ||| || || Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCA-CTTGGTTCAAC 668213 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || ||||| |||||||| ||||| |||||||| Sbjct 668214 TTCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 109 bits (120), Expect = 5e-19 Identities = 146/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 || ||||| || || | ||| || || | | | |||| || ||| || || ||||||| Sbjct 666469 GTGGATTCTTTCTGTATGTTGTAGTC--TGACAATGTTCGACCATCTTCTAGTTGTTTTC 666526 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || |||| || | |||||||||||||| || || |||||||| || | |||||| || | Sbjct 666527 CGGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCCTTCTTTATCTTGAATTTTAGCTT 666586 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 ||||| | | |||||| | | || || || | ||||| |||||||| || |||| Sbjct 666587 TGACGTTTTCTATTGTGTCACTGGGCTCTACCTCTAAAGTGATAGTTTTTCCTGTTAGAG 666646 Query 94989 TTTTCACAAAGATCTGCATGC 95009 | || || || || ||||||| Sbjct 666647 TCTTAACGAAAATTTGCATGC 666667 Score = 105 bits (116), Expect = 6e-18 Identities = 169/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || |||||||| | | |||||| | || || || || |||||||| | | Sbjct 666655 AAAATTTGCATGCCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATG 666714 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 ||||| || | ||| | ||| || | ||| || ||| ||||||| | | ||| Sbjct 666715 TTATAGTCAGATAAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGT 666774 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || || ||||||||||||||||| || | || || || || || | | ||||||| Sbjct 666775 TGGTCGGGAGGAATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCA 666834 Query 94949 GCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||| || || || | || || ||||| || || |||||||| || ||||||||||| Sbjct 666835 -CTTGGTTCAACCTCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 || || ||||| || | ||| || || | | |||||| || |||||| |||||||||| Sbjct 666925 GTGGACTCCTTCTGAATGTTGTAGTC--TGAGAGTGTTCGACCATCCTCTAGCTGTTTTC 666982 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | | || || | ||| || ||||| |||||||| |||||||| || | |||||| || | Sbjct 666983 CAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATCTTGAATTTTGGCTT 667042 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | ||| | | ||| ||| | || || || | || || ||||| ||||| | | Sbjct 667043 TTACGTTTTCAATAGTATCACTAGGTTCTACTTCCAAAGTTATTGTTTTGCCAGTCAATG 667102 Query 94989 TTTTCACAAAGATCTGCAT 95007 |||||||||| |||||||| Sbjct 667103 TTTTCACAAATATCTGCAT 667121 Score = 100 bits (110), Expect = 3e-16 Identities = 120/161 (75%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||||| ||||||||||| || | ||||| || | ||| ||||||||||| | ||| || Sbjct 666123 TTACATTCCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTA 666182 Query 94834 ATCGCTCATAGTGTTGG--AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891 | || | || ||| | ||| || || || || ||| |||| || | | |||||| Sbjct 666183 GT--CTGAAAGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGA 666240 Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 || ||||| ||||| |||||||| | ||||||||| ||||| Sbjct 666241 TCGGGAGGGATACCCTCTTTGTCTTGAATTTTTGCTTTGAC 666281 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||||||||||| | |||||||| | |||||||| || || | || || || | Sbjct 668491 CCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAC 668550 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | | || || ||| |||| || || || | ||||| || || |||||||| || | Sbjct 668551 A--GGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTG 668608 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| ||||||||||| | || ||||| || || | | |||||| | || | Sbjct 668609 GAATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAA 668668 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||| ||||| ||||| | || || ||||| |||||||| Sbjct 668669 CCTCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCAT 668717 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/248 (68%), Gaps = 1/248 (0%) Strand=Plus/Plus Query 94761 GTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCC 94819 ||||| |||| ||| || || || | ||||| | ||||| || | || ||||| Sbjct 667330 GTTTTGACAAATATTTGCATACCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCT 667389 Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 ||||| | || |||||| || || | ||| || | ||| || || | || || Sbjct 667390 TTTTGGATATTGTAATCGGACAATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATC 667449 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 || ||||| ||||||||||| || ||||| || || | ||||||||| || || | Sbjct 667450 AACCTTTGTTGATCTGGAGGGATGCCTTCCTTATCTTGAATTTTTGCTTTCACATTTTCA 667509 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | || ||| | || || || | || ||||| ||||| || | |||||||||||| Sbjct 667510 ATTGTATCACTAGGCTCTACTTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAA 667569 Query 95000 ATCTGCAT 95007 || ||||| Sbjct 667570 ATTTGCAT 667577 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--A 94852 ||| |||| || | |||||||| ||||| | ||| ||||| | | || ||| | | Sbjct 667137 CAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATC--TGAGAGGGTTCGGCCA 667194 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || || |||| || | | || ||||| || ||||||||||| || Sbjct 667195 TCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATACCTTCCTTA 667254 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGAT 94971 || | |||||| || || || | | || ||| | ||| || || || | || || Sbjct 667255 TCTTGAATTTTAGCTTTCACATTTTCTATGGTATCA-CTTGGTTCAACTTCTAGTGTAAT 667313 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || |||||||| ||||| || ||||| Sbjct 667314 AGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 >seq435 Length=3082058 Score = 111 bits (122), Expect = 1e-19 Identities = 169/239 (71%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 94771 ATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTT 94830 ||||||| || |||||||| || | ||||| ||| | || ||||| ||||| | || Sbjct 740589 ATTTTACTATCGGCCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTC 740648 Query 94831 ATAATCGCTCATAGTG--TTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 |||||| | |||| || | || |||| ||| || || |||| || | ||||| Sbjct 740649 ATAATCTGATAGAGTGCGTTTG--TCATCCAACTGCTTACCCGCAAATATCAGCCTTTGT 740706 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 |||||||||||||| ||||||| || | ||||||| || || || |||||| Sbjct 740707 TGATCTGGAGGAATTCCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCA 740766 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || |||| || || ||||||||||| || ||||| ||||| || ||||| Sbjct 740767 GACGACTCTACTTCAAGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCAT 740825 >seq13703 Length=2289824 Score = 100 bits (110), Expect = 3e-16 Identities = 102/131 (78%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 94778 ACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCG 94837 || || || ||||| || | || || || | ||||||||||||||| | ||||||||| Sbjct 2085158 ACACCACCCCTCAAACGAAGAACTAAATGAAGAGTAGATTCCTTTTGAATGTTATAATC- 2085216 Query 94838 CTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTG 94895 | |||| ||| | ||| |||| |||||| ||| |||| ||||||||||| ||||| | Sbjct 2085217 -TGATAGAGTTCGTCCATCTTCCAACTGTTTGCCGGCAAAAATTAATCTTTGTTGATCAG 2085275 Query 94896 GAGGAATACCT 94906 | ||||||||| Sbjct 2085276 GGGGAATACCT 2085286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448198555019880