Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4472 100 3e-16 >seq4472 Length=7509737 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 || ||| | ||||| || ||||||||||| ||||| || || | |||||| || Sbjct 666681 CAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGGCCATC 666740 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 |||| |||||| || || |||| | ||| || ||||| ||||| || |||||||| || Sbjct 666741 TTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCTTCTTTATC 666800 Query 131142 GGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGG 131200 ||| || |||| | | | || | ||| || | | || | || | |||| | Sbjct 666801 TTGGATCTT-GGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTAATAG 666859 Query 131201 TTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || ||||||||||||||||| |||||||| Sbjct 666860 TTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || | || ||| || || | || || || ||||||||||| || || Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||| || ||||| |||| | | ||||| || ||||| Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| |||||| |||| | | | ||| | |||||| | | ||| | Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTT-GGCTTTAACGTTCTCAATAGTATCACTAGGCTCTAC 667985 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||||| || || ||||| |||||||||||||| Sbjct 667986 TTCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 89.7 bits (98), Expect = 5e-13 Identities = 110/149 (74%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||| || || ||||| | || || ||||||||||||||||| || Sbjct 666130 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAA 666189 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| || || || |||||||| || | || | ||||||||| || |||||| Sbjct 666190 AGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGG 666249 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || || |||||||| ||| ||| ||||| Sbjct 666250 ATACCCTCTTTGTC-TTGAATTTTTGCTT 666277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471915252654720