Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4472 93.3 3e-14 >seq4472 Length=7509737 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || |||||||| || | ||| || ||||| || || |||||||||||||| | | Sbjct 666439 CCTCCACGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGAC 666498 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || || | |||||| || ||| ||||||||| || || || || Sbjct 666499 AATGTTCGACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGG 666558 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || ||||| || ||||| ||| || || | | | ||||| | |||||| Sbjct 666559 ATTCCTTCTTTATCTTGAATTTTAGCT--TTGACGTTTTCTATTGTGTCACTGGGCTCTA 666616 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| |||||||| || || || || || ||||| ||||| Sbjct 666617 CCTCTAAAGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| ||||||| ||| | ||||| || || || ||||| ||||| || || | Sbjct 667579 CCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGAT 667638 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || || | |||||||| ||| |||| | ||||||||||| || Sbjct 667639 AATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGA 667698 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||| || || ||||| ||| || | | | ||||| | ||||| Sbjct 667699 ATACCCTCTTTATCTTGGATTTTTGC--CTTTACATTTTCTATGGTGTCACTAGGCTCAA 667756 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||||||||||| || | |||||||||||||| ||||| Sbjct 667757 CTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||||||| ||| || ||||| |||||||| ||||||||||| | Sbjct 666130 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAA 666189 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | || || | ||| ||||| ||| |||| || ||||| || || ||| Sbjct 666190 AGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGG 666249 Query 16829 ACGCCCTCTTTGTCGGCAATTT 16850 | ||||||||||| ||||| Sbjct 666250 ATACCCTCTTTGTCTTGAATTT 666271 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || | ||||| || | ||| || ||||||||||| || ||||||||||| | Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 666954 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | ||||| || || ||||||| | |||||| || ||| Sbjct 666955 AGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGA 667014 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || ||||| || ||||| ||| || || | | | ||| || | || || Sbjct 667015 ATTCCTTCTTTATCTTGAATTTTGGCT--TTTACGTTTTCAATAGTATCACTAGGTTCTA 667072 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || ||||| || |||| ||||| ||||| |||||||| Sbjct 667073 CTTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| ||||||| |||| ||| || || || || ||||| |||||||| || | Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || || | || || || ||| |||| || |||||||| || || Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || ||||| ||| ||||| | | | || || | || || Sbjct 667243 ATACCTTCCTTATCTTGAATTTTAGCT--TTCACATTTTCTATGGTATCACTTGGTTCAA 667300 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || |||||||| ||||| ||||||||||| || ||||| Sbjct 667301 CTTCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405006376413670