Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq14591 138 8e-28 seq4472 120 2e-22 seq435 105 4e-18 seq12329 93.3 3e-14 seq13703 86.0 4e-12 >seq14591 Length=813827 Score = 138 bits (152), Expect = 8e-28 Identities = 88/96 (92%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCTCG 25955 |||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 796949 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGAATCTCG 797008 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||| |||||||||||||||||||||||||||| Sbjct 797009 TTAATCCATTCATGCGCGTCACTAATTAGATGACGA 797044 >seq4472 Length=7509737 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| | ||| || | |||||| ||| |||||| ||||| ||||| || | Sbjct 666893 TACCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTG 666952 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || |||| |||||||| || || || || | |||||||||| | Sbjct 666953 AGAGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAG 667012 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||||| || |||||| || || || | | |||||| | | ||| | Sbjct 667013 GAATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTA 667072 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || || || ||||| || ||||| |||||||| ||||||||||| Sbjct 667073 CTTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || | ||||||||| || |||||| || |||||||| || || || | Sbjct 667805 TACCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTG 667864 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | ||||| || ||||| || || | ||| ||||| | | Sbjct 667865 AAAGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAG 667924 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| ||||| ||||| || || |||| | |||||| | | || | Sbjct 667925 GAATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTA 667984 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||||| ||||||||||| || | ||||| ||||| |||||||| Sbjct 667985 CTTCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| | | |||||||| || ||| || ||||| ||||||||||| | Sbjct 667349 TACCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGG 667408 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | | | || ||||| || || || || || || | | ||||||||| | | Sbjct 667409 ACAATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAG 667468 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||| || || ||||||| |||||||| | | ||||| | | || | Sbjct 667469 GGATGCCTTCCTTATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTA 667528 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| || || || || || || || |||||||| || || ||||| Sbjct 667529 CTTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | || |||||| ||||| || || |||||||| || || || | Sbjct 668033 TACCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCG 668092 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | ||||||||| ||||| || || ||||| ||||| | | Sbjct 668093 AAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTG 668152 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| ||||| || ||||| | | ||||| | ||||| Sbjct 668153 GAATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAA 668212 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||| ||||| || || || || | ||||| || || |||||||| Sbjct 668213 CTTCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 109 bits (120), Expect = 4e-19 Identities = 148/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||||| ||| | ||||||||||||||| ||||||||||| ||||| | Sbjct 666126 CATT-CCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGT 666184 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | || | || || | ||| || |||||||| || || || || ||||||| Sbjct 666185 CTGAAAGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGG 666244 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| || |||||||| ||||||| || ||||| | | |||||| | | Sbjct 666245 GAGGGATACCCTCTTTGTCTTGAATTTTTGCTTTGACATTTTCAATAGTATCACTCTGCT 666304 Query 38266 CAACTTCTAATGTAATAGTTTTACC 38290 |||||||||| ||||| || || || Sbjct 666305 CAACTTCTAAAGTAATTGTCTTGCC 666329 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||| | | |||||| | ||| | || ||||||||| || || || ||||| Sbjct 666667 CCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGAT 666726 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || | || ||||| || || |||||||| || || |||||||| |||| || Sbjct 666727 AAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 666786 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||| || || || || ||||| | | ||| || | |||||| Sbjct 666787 ATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACC 666846 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| ||||||||||| || || | ||||| ||||| |||||||| Sbjct 666847 TCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||||||| | | ||||| ||||| || || || ||||||||||| |||| Sbjct 668489 TACCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAG 668548 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || || ||||| || || || || || | | || ||||| | | Sbjct 668549 ACAGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTG 668608 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||||||||| || ||| |||||||||| | || || | | |||| Sbjct 668609 GAATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAA 668668 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | |||| ||| |||||||| || || || || || || || |||||||| || Sbjct 668669 CCTCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATTTT 668720 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||| | | ||| |||| ||| || || || ||||| || |||||||| | Sbjct 667121 TACCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTG 667180 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | || || || ||||| || || || |||||||||| | Sbjct 667181 AGAGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTG 667240 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| || || |||||| |||||||| | | ||||| | ||||| Sbjct 667241 GAATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAA 667300 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||| |||||||||||| || |||| ||||| || ||||| ||||| Sbjct 667301 CTTCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||||| | ||| || | ||| | ||| || ||||| || || |||| Sbjct 667575 CATT-CCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAAT 667633 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || || ||| | || || | ||||| |||||||| |||| || ||||| || | Sbjct 667634 CTGATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAG 667693 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | || ||||| || |||||| ||| ||||| | | || || | | | Sbjct 667694 GTGGAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCT 667753 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||||||||| || ||||| || || || ||||| || || || ||||| Sbjct 667754 CAACTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||| ||| || || || || ||||| || ||||| || | || |||| ||| Sbjct 666462 ATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGACAATGTTCGACCATCTTCTAGTTG 666521 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 |||||||||||| || || | ||| ||||| | ||||| |||||||| || |||||| Sbjct 666522 TTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCCTTCTTTATCTTGAATTTT 666581 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 || || || | | || || | || || ||||| || |||||||| || || Sbjct 666582 AGCTTTGACGTTTTCTATTGTGTCACTGGGCTCTACCTCTAAAGTGATAGTTTTTCCTGT 666641 Query 38294 CAAGGTTTTCACGAATATCTGCATG 38318 | || || ||||| || |||||| Sbjct 666642 TAGAGTCTTAACGAAAATTTGCATG 666666 >seq435 Length=3082058 Score = 105 bits (116), Expect = 4e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38094 CCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAA 38153 ||||||||||| | ||||| ||||| || || |||||||| | ||||| || | | Sbjct 740602 CCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGA 740661 Query 38154 ACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACG 38213 |||| ||| || || || || || |||||||| || | ||||||||| | || | Sbjct 740662 GTGCGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATT 740721 Query 38214 CCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATC--TCCACTTTCAACTT 38271 ||||||| || ||||||||| |||||| | | || || || | || || |||| Sbjct 740722 CCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGAC--TCTACTT 740779 Query 38272 CTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | | || || ||||| || |||| |||||| || || || ||||| || Sbjct 740780 CAAGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 >seq12329 Length=4673324 Score = 93.3 bits (102), Expect = 3e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 |||| || |||||||| || ||||||||||| ||||| || |||||||| ||||| | Sbjct 135015 ACCCAACCAAATATTTTGGATGCGAACTTGGTGCTCAAACACAGTTTGACTTGAAAAATG 134956 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 |||| | || ||||| || || || | |||| ||||| ||||| | | || || | Sbjct 134955 AGCGTTATATTGTTAATGGTTCTCACGAAGCTGCAAAGCTACAGGATCTCTTGGATGGGT 134896 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484 |||| || ||||| |||||| |||||||| ||||| || Sbjct 134895 TTATCAAGAAATTTGTTTTGTGTCCTTCTTGCGATAATCCGGAAAC 134850 >seq13703 Length=2289824 Score = 86.0 bits (94), Expect = 4e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| |||||||| | || ||||||||||| ||||||||||| || ||||| || Sbjct 2085160 ACCACCCCTCAAACGAAGAACTAAATGAAGAGTAGATTCCTTTTGAATGTTATAATCTGA 2085219 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | ||| | || || || ||||| |||||||| |||| | ||||||||| | ||| Sbjct 2085220 TAGAGTTCGTCCATCTTCCAACTGTTTGCCGGCAAAAATTAATCTTTGTTGATCAGGGGG 2085279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334879709499923