Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4472 152 4e-32 seq435 122 8e-23 seq11726 105 6e-18 seq13703 87.8 2e-12 >seq4472 Length=7509737 Score = 152 bits (168), Expect = 4e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || || ||| |||||||| | ||||| ||| | | Sbjct 667805 ATGCAAATTTTTGTCAAAACTTTAACTGGAAAAACCATCACATTAGAAGTTGAGCCTAGT 667746 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| ||||||| || ||||| || ||||||||||||||| Sbjct 667745 GACACCATAGAAAATGTAAAGGCAAAAATCCAAGATAAAGAGGGTATTCCACCTGACCAA 667686 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||||||||||||||| | ||||||| || || | ||||| || Sbjct 667685 CAGCGTTTAATTTTTGCCGGCAAACAGCTTGAAGATGGGCGTACATTATCAGATTATAAC 667626 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||||||||| || | ||| | || | ||||| |||||||||| Sbjct 667625 ATCCAAAAAGAATCTACTTTGCATCTTGTATTGAGGCTGAGAGGAGGAA 667577 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| || || || ||| | |||||| | || || ||| | Sbjct 668718 AATGCAGATTTTTGTTAAGACATTAACTGGCAAAACTATCACACTAGAGGTTGAGCCTAG 668659 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| || ||| |||| ||| ||| ||||||||||| ||||||||||| || Sbjct 668658 TGACACGATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGAATTCCACCTGATCA 668599 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || || || || ||||| ||||||| ||| || || || ||||| Sbjct 668598 GCAGAGGTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGTACCCTGTCTGACTACAA 668539 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||| |||||||| || || || || || ||||| | |||||||| Sbjct 668538 TATTCAGAAAGAATCTACACTTCACTTGGTTCTAAGATTGAGAGGAGG 668491 Score = 131 bits (144), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || || ||| | ||||| | || || ||| | | Sbjct 666665 ATGCAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAGT 666606 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| |||| |||| ||| || |||||||| || || || || Sbjct 666605 GACACAATAGAAAACGTCA---AAGCTAAAATTCAA-GATAAAGAAGGAATCCCCCCAGA 666550 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || || || ||||||||||||| |||||| ||||||||| ||| || || || || Sbjct 666549 TCAGCAAAGGCTTATTTTTGCCGGAAAACAACTAGAAGATGGTCGAACATTGTCAGACTA 666490 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||| || || ||||||||||| || ||| | || || ||||| | ||||||| Sbjct 666489 CAACATACAGAAAGAATCCACACTTCATCTTGTCCTGAGGCTGCGTGGAGGAA 666437 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || |||||| | |||||| | ||||| ||| | | Sbjct 668033 ATGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGT 667974 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| ||| | | |||| |||| || ||||| ||||| ||||| ||||| || Sbjct 667973 GATACTATTGAGAACGTTAAAGCCAAAATCCAA-GACAAGGAAGGAATTCCTCCTGATCA 667915 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || |||| ||||| || ||||| | ||||||| ||||||| | || || || Sbjct 667914 GCAAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAA 667855 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||||| || || || ||| | ||| ||||||| || Sbjct 667854 CATTCAAAAAGAATCCACTCTCCACTTGGTGTTGAGGTTAAGAGGTGG 667807 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || ||||| ||||| || |||| || | ||||| ||| | Sbjct 667578 AATGCAAATTTTTGTGAAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGAGCCTAG 667519 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || |||| ||||||| ||| || || ||||| || || || || | Sbjct 667518 TGATACAATTGAAAATGTGAAAGCAAAAATTCAA-GATAAGGAAGGCATCCCTCCAGATC 667460 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | ||||| || || || || |||||||||| | || || |||||||| Sbjct 667459 AACAAAGGTTGATTTTCGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACA 667400 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 |||| |||||||||||||| || ||||| || ||||| Sbjct 667399 ATATCCAAAAAGAATCCACCCTCCATTTGGTTCTAAG 667363 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 |||||| ||||||||||| ||||||||||| || || || | |||||||| || ||| Sbjct 668177 AAAATCCAAGACAAAGAAGGTATTCCACCTGATCAGCAACGTCTGATTTTTGCTGGAAAA 668118 Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202 ||| | ||||||| ||||||| | || || || |||||||||||||| || || || Sbjct 668117 CAACTTGAAGATGGTCGCACTCTTTCGGACTATAACATTCAAAAAGAATCTACACTTCAC 668058 Query 25203 TTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||| | ||||| || Sbjct 668057 TTGGTGCTGAGGTTGAGAGGTGG 668035 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || |||||||| || || |||| || | ||||| || | | Sbjct 668489 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGT 668430 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| |||||| ||||||||||| ||||| |||||||| Sbjct 668429 GACACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAG 668370 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| ||||| || | ||||||| || || | ||||| || Sbjct 668369 CAACGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTTCAGATTATAAC 668310 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || |||||||| || | ||||| || || || ||||| ||||| Sbjct 668309 ATACAGAAAGAATCAACTTTGCATTTGGTACTCAGACTAAGGGGAGG 668263 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || ||| |||| || ||| | || ||| | ||||| || | | Sbjct 667349 ATGCAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGT 667290 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || |||| || |||| ||| || || ||||| |||||||| || || Sbjct 667289 GATACCATAGAAAATGTGAAAGCTAAAATTCAA-GATAAGGAAGGTATTCCACCCGATCA 667231 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | |||||||| || || || | ||||||| || || | |||||||| Sbjct 667230 ACAGCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAA 667171 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||| || || ||| | || | ||||| |||| || Sbjct 667170 CATCCAAAAAGAATCTACACTCCATCTGGTTTTGAGGCTTCGAGGTGG 667123 Score = 107 bits (118), Expect = 2e-18 Identities = 138/188 (73%), Gaps = 8/188 (4%) Strand=Plus/Minus Query 25044 GAAGTGGAGTCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGA 25099 ||||| ||| | ||| ||||| || |||| ||||||||| ||| |||||||| Sbjct 666311 GAAGTTGAGCAGAGTGATACTATTGAAAATGTCA---AAGCAAAAATTCAA-GACAAAGA 666256 Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 || || || || || || ||||| | |||||||||||||| ||| | ||||||| || Sbjct 666255 GGGTATCCCTCCCGATCAGCAGCGTCTCATTTTTGCCGGCAAGCAACTTGAAGATGGGCG 666196 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 || | || ||||| |||||||| |||||||| || ||||| || || | || || Sbjct 666195 AACCCTTTCAGACTACAACATTCAAAAGGAATCCACTCTTCATTTGGTACTCCGTCTGAG 666136 Query 25220 AGGAGGAA 25227 |||||||| Sbjct 666135 AGGAGGAA 666128 >seq435 Length=3082058 Score = 122 bits (134), Expect = 8e-23 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || |||||||| || |||| || ||| | || || | ||||| |||||||| Sbjct 740826 AATGCATATTTTTGTAAAAACCCTGACTGGAAAAACAATAACTCTTGAAGTAGAGTCGTC 740767 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| ||| | |||| |||||||| || ||||||| ||||| || || || Sbjct 740766 TGACACCATCAATATTGTGAAACAAAAAATTCAAGATGAAGAAGGAATTCCTCCAGATCA 740707 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| || || || || || || | |||||| | ||||| | Sbjct 740706 ACAAAGGCTGATATTTGCGGGTAAGCAGTTGGATGACAAACGCACTCTATCAGATTATGA 740647 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGG 25222 |||||||||||||| ||||| || | |||||| | | ||||| Sbjct 740646 CATTCAAAAAGAATCAACGCTTCACATGGTGCTACGTTTGAGAGG 740602 >seq11726 Length=1646561 Score = 105 bits (116), Expect = 6e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||| |||||||||||||| | || ||||| |||||||| || ||||||| || Sbjct 660029 AGGAATTCCCCCTGACCAACAGCGATTGATCTTTGCTGGCAAACAGTTGGAAGATGGGCG 660088 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 || | ||||||||||||||| ||||| || || |||||||||| || || || || Sbjct 660089 AACACTATCCGATTACAATATTCAGAAAGAGTCTACTTTACATTTAGTACTCAGACTTAG 660148 Query 25220 AGGAGG 25225 ||| || Sbjct 660149 AGGTGG 660154 >seq13703 Length=2289824 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||| ||||| ||||| | | ||||||||||||||||| || ||||||| || Sbjct 2085286 AGGTATTCCCCCTGATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACG 2085227 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| | ||||| || |||||||| ||||| || || |||||||| || Sbjct 2085226 AACTCTATCAGATTATAACATTCAAAAGGAATCTACTCTTCATTTAGTTCT 2085176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433240686168395