Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq6746 107 2e-18 seq546 107 2e-18 seq9489 105 7e-18 seq3452 104 3e-17 seq4509 102 9e-17 seq7278 98.7 1e-15 seq10069 96.9 4e-15 seq9967 96.9 4e-15 seq5325 87.8 2e-12 >seq6746 Length=1479980 Score = 107 bits (118), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126260 TTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCG 126317 |||| ||||||| |||||||| |||||||||||||||||||||| |||||||| | | Sbjct 757206 TTTAAAGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAG 757147 Query 126318 GGAGCGTGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||| ||||||| Sbjct 757146 AGAGCGTGGGTTCGAACCCCACTTCTGACAA 757116 Score = 104 bits (114), Expect = 3e-17 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 126259 ATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TC 126316 ||||| ||||||| |||||||| |||||||||||||||||||||| |||||||| | Sbjct 772610 ATTTA-AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAA 772552 Query 126317 GGGAGCGTGGGTTCGAACCCCACACCTGACA 126347 | ||||||||||||||||||||| |||||| Sbjct 772551 GAGAGCGTGGGTTCGAACCCCACTTCTGACA 772521 Score = 102 bits (112), Expect = 9e-17 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||| | | |||| Sbjct 616995 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 617054 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 617055 GTGGGTTCGAACCCCACTTCTGACA 617079 Score = 102 bits (112), Expect = 9e-17 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||| | | |||| Sbjct 714959 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 715018 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 715019 GTGGGTTCGAACCCCACTTCTGACA 715043 Score = 102 bits (112), Expect = 9e-17 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||| | | |||| Sbjct 757509 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 757450 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 757449 GTGGGTTCGAACCCCACTTCTGACA 757425 Score = 102 bits (112), Expect = 9e-17 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||| | | |||| Sbjct 772915 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 772856 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 772855 GTGGGTTCGAACCCCACTTCTGACA 772831 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| ||||||||||||| |||||||| |||||||| | | |||| Sbjct 771967 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCTGATTTAAGCTCTGGTTCTCGAAAGAGAGC 771908 Query 126323 GTGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||| ||||||| Sbjct 771907 GTGGGTTCGAACCCCACTTCTGACAA 771882 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/90 (82%), Gaps = 4/90 (4%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| ||||| |||||||||||| ||||||||| || |||||||| | | |||| Sbjct 772287 AGTCAGGATGGCCAAGTGGTCTAAGGTGCCAGATTTGAGCTCTGGTTCTCGAAAGAGAGC 772228 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTA 126352 ||||| ||||||||||| ||| |||||| Sbjct 772227 GTGGGCTCGAACCCCACTTCTG--AAATTA 772200 >seq546 Length=398126 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 93128 ATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATT 93187 || || ||||| |||||||| | ||| || | || |||| ||||| | ||| || || Sbjct 248742 ATTAATTCATTACTGAATGTGAGACCAGGCATAAGACCTCTCTTCTTCAACCAGAAAATA 248683 Query 93188 GAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCG 93247 || ||||| ||||| |||||||| |||||||||||||||||||| |||| | ||| Sbjct 248682 GATGCAAAGGAGCCAGAGAAAAATATGCCTTCCACGGCTGCAAATGCAACAACTCTTTCT 248623 Query 93248 GCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATA 93307 |||| || | || |||||||| || | ||||| || || || | |||| | Sbjct 248622 CCAAAGGAAGCATTCGTGCTACTGATCCAGTTCAGCGCCCAGTCCGCCTTCCTTTTAACA 248563 Query 93308 CAAGGTAGTGTTTCGATAGCGTTAAATAG 93336 || || | |||||||| || || || || Sbjct 248562 CAGGGCAAAGTTTCGATCGCATTGAACAG 248534 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 93365 TATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAAT 93424 |||||||| ||||||| |||||||| |||||||||||||| || || ||||| || Sbjct 245606 TATGTATCAATTAACAAGCTGTACATTTCTGAATGGACATTCTCAATAGCTATTTGAAAA 245547 Query 93425 CCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463 || || |||||||| || || || | ||| ||||||||| Sbjct 245546 CCATAAAAACATCTGGCCTCTGTAACCTGAACTTCTTGA 245508 >seq9489 Length=1506822 Score = 105 bits (116), Expect = 7e-18 Identities = 79/92 (86%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| ||||||||||||||||||||||||||||||| |||||||| | | |||| Sbjct 13359 AGTCAGAATGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 13300 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATT 126354 ||||||||||||||||| ||||||| |||| Sbjct 13299 GTGGGTTCGAACCCCACTTCTGACAAGGTATT 13268 Score = 96.9 bits (106), Expect = 4e-15 Identities = 74/87 (85%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| |||||||| ||||||||||||| |||||||| |||||||| | | |||| Sbjct 14857 AGTCAGAATGGCCGAGAGGTCTAAGGCGCCTGATTTAAGCTCTGGTTCTCGAAAGAGAGC 14798 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||| |||||||| Sbjct 14797 GTGGGTTCGAACCCCACTTCTGACAAA 14771 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| ||||||||||||||||||||||||||||||| ||| |||| | | ||| Sbjct 13588 AGTCAGAATGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTAGTTCTCGAAAGAGAGT 13529 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTA 126352 ||||| ||||||||| | |||||||| || Sbjct 13528 GTGGGATCGAACCCCGCTTCTGACAAAGTA 13499 >seq3452 Length=17538621 Score = 104 bits (114), Expect = 3e-17 Identities = 75/86 (87%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||| |||||||| |||||||||||||||||||||| |||||||| | | ||||| Sbjct 12025226 GTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGCG 12025167 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||| |||||||| Sbjct 12025166 TGGGTTCGAACCCCACTTCTGACAAA 12025141 >seq4509 Length=1598347 Score = 102 bits (112), Expect = 9e-17 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||| | | |||| Sbjct 476866 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 476925 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 476926 GTGGGTTCGAACCCCACTTCTGACA 476950 >seq7278 Length=584056 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| |||||||||||||||||||| |||||||||| |||||||| | | |||| Sbjct 567793 AGTCAGAATGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 567734 Query 126323 GTGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||| ||||||| Sbjct 567733 GTGGGTTCGAACCCCACTTCTGACAA 567708 >seq10069 Length=9150472 Score = 96.9 bits (106), Expect = 4e-15 Identities = 79/95 (83%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||| |||||||| ||||||||||||||| |||||| |||||||| | | ||||| Sbjct 4837004 GTCAGGATGGCCGAGCGGTCTAAGGCGCCAGGTTTAAGCTCTGGTTCTCGAAAGAGAGCG 4837063 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATTG 126358 |||||||||||||||| |||||| || | | ||| Sbjct 4837064 TGGGTTCGAACCCCACTTCTGACATATAACTTTTG 4837098 >seq9967 Length=7999 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| |||||||| |||||||||||||||||||||| |||||||| | | |||| Sbjct 7059 AGTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 7000 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 6999 GTGGGTTCGAACCCCACTTCTGACA 6975 >seq5325 Length=13998945 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||| |||||||| |||||||||||||||||||||| |||| ||| | | ||| | Sbjct 11609085 GTCAGGATGGCCGAGAGGTCTAAGGCGCCAGATTTAAGTTCTGATTCTCGAAAGAGAGTG 11609144 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||| |||||||||| ||||||| Sbjct 11609145 TGGGTCCGAACCCCACTTCTGACAA 11609169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556745717754920