Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq4472 114 1e-20 seq13703 87.8 2e-12 >seq4472 Length=7509737 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||||||| ||||| | ||||| || ||||| || | ||| || || || Sbjct 667578 AATGCAAATTTTTGTGAAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGAGCCTAG 667519 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || ||| ||||||| || || |||||| | || ||||| Sbjct 667518 TGATACAATTGAAAATGTGAAAGCAAAAATTCAAGATAAGGAAGGCATCCCTCCAGATCA 667459 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||||||| | |||| || || || || || |||||| | ||| || ||||||| || Sbjct 667458 ACAAAGGTTGATTTTCGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACAA 667399 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| ||||||||||| || || ||||| || | | |||| ||||| Sbjct 667398 TATCCAAAAAGAATCCACCCTCCATTTGGTTCTAAGATTGCGTGGTGG 667351 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||| ||||| | || || || || ||||| | ||| ||||| || Sbjct 668261 ATGCAGATTTTTGTTAAAACTCTAACTGGGAAGACAATTACTCTAGAAGTTGAACCAAGT 668202 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | |||||| ||||| ||||||||||| |||| ||||| Sbjct 668201 GATACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAG 668142 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| ||| || |||||| | |||||| | ||| | | || ||||| Sbjct 668141 CAACGTCTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCGGACTATAAC 668082 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||||||||||||||| || || ||| || | || | ||||| Sbjct 668081 ATTCAAAAAGAATCTACACTTCACTTGGTGCTGAGGTTGAGAGGTGG 668035 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| ||||||||||| |||| || ||||| ||||| | ||| ||||| || Sbjct 667349 ATGCAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGT 667290 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | || ||| |||||| || || ||||| |||| ||||||| Sbjct 667289 GATACCATAGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCCGATCAA 667230 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| || || || | |||||| ||| | | ||||| || Sbjct 667229 CAGCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAAC 667170 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||||||||||||||| ||| | || ||| | || || ||||| Sbjct 667169 ATCCAAAAAGAATCTACACTCCATCTGGTTTTGAGGCTTCGAGGTGG 667123 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| |||||||| | || || ||||| || || | ||| || || || Sbjct 668033 ATGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGT 667974 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | || ||| ||||| ||||| ||||| |||| ||||| Sbjct 667973 GATACTATTGAGAACGTTAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAG 667914 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||||||||| | ||| || ||||| | |||||| | ||| | | || ||||| Sbjct 667913 CAAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAAC 667854 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 || ||||||||||| || || || || |||||| Sbjct 667853 ATTCAAAAAGAATCCACTCTCCACTTGGTGTTG 667821 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||||||||| |||| ||||| ||||| ||| ||||| |||||||| Sbjct 668489 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGT 668430 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | ||||| ||||| ||||||||||| ||||| || || Sbjct 668429 GACACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAG 668370 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111364 ||| | | |||| ||| ||||| || | |||||| | | ||| | | ||||||| Sbjct 668369 CAACGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTT--CAGATTATA 668312 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGT 111395 | ||||| |||||||| || | ||||| || Sbjct 668311 ACATACAGAAAGAATCAACTTTGCATTTGGT 668281 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || || || | || || ||||| || || | || || ||||| Sbjct 666665 ATGCAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAGT 666606 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | | | | || ||| |||||| || |||||||| | ||| ||||| Sbjct 666605 GACACAATAGAAAACGTCAAAGCTAAAATTCAAGATAAAGAAGGAATCCCCCCAGATCAG 666546 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||||||||||| ||| || |||||| | |||||| | ||| || | || || || Sbjct 666545 CAAAGGCTTATTTTTGCCGGAAAACAACTAGAAGATGGTCGAACATTGTCAGACTACAAC 666486 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| |||||||| ||||| ||| | || || | ||||| || || Sbjct 666485 ATACAGAAAGAATCCACACTTCATCTTGTCCTGAGGCTGCGTGGAGG 666439 >seq13703 Length=2289824 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 111293 TTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTA 111352 ||||| ||||||||||| | |||| ||| |||||||| ||||||||| |||| Sbjct 2085281 TTCCCCCTGATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACGAACTC 2085222 Query 111353 TGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTG 111412 | | |||||||| || ||||| |||||||| || |||||||| | ||| || | |||| Sbjct 2085221 TATCAGATTATAACATTCAAAAGGAATCTACTCTTCATTTAGTTCTTCGTTTGAGGGGTG 2085162 Query 111413 G 111413 | Sbjct 2085161 G 2085161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422954759158600