Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4472 158 2e-33 seq12197 87.8 3e-12 seq10138 87.8 3e-12 seq7291 87.8 3e-12 seq3083 87.8 3e-12 seq667 87.8 3e-12 seq15004 86.0 1e-11 seq6098 86.0 1e-11 seq2939 86.0 1e-11 seq138 86.0 1e-11 >seq4472 Length=7509737 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| |||| || || || || |||||||||||||| ||||| ||| Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || || | ||||| ||||||||| Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| |||||||| || || || || || ||||| || || ||| ||| Sbjct 667243 ATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACT 667302 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || |||||||| || || || ||||| ||||| ||||| Sbjct 667303 TCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || ||||| ||||||||||| || |||||||| | ||| || ||||||||| Sbjct 667369 ACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCCATCTTCT 667428 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| || ||||| || | |||||||| || || || ||||||||||| |||||| Sbjct 667429 AACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTTATCTTGA 667488 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || ||||| || || || || || || | |||||||| || || ||||| ||| Sbjct 667489 ATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTATGGTCTTT 667548 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | || || || || || |||||| Sbjct 667549 CCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| |||||||| |||||||| || || || || | ||||| Sbjct 667821 CAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCATC 667880 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | ||| || || || || || || ||||| || || || ||||| ||||||||||| Sbjct 667881 TTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTC 667940 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || || ||| ||| || || || | |||||||| || ||||| || Sbjct 667941 TTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGATAGT 668000 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || || |||||||| |||||||| Sbjct 668001 TTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || | ||| || | |||| || ||||| |||||||||||||| || || Sbjct 666667 CCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGAT 666726 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||||||||||||||||||||| || || || | |||||||||||| ||| Sbjct 666727 AAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 666786 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || ||||| ||||| || || || || || ||||| || ||| || Sbjct 666787 ATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACC 666846 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||| || || || || || ||||| |||||||| Sbjct 666847 TCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || | |||||| | || | || || |||||||||||||||||||| | Sbjct 667577 TTCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTG 667636 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | ||| | ||||||||| | ||| || ||||| || || | | |||||||| |||| Sbjct 667637 ATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTG 667696 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| || || || ||||| || |||||||| || || |||||||| | || | Sbjct 667697 GAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAA 667756 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || |||||||||||||| || | || ||||| || || ||||| Sbjct 667757 CTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || |||||||| || || ||||| || || |||||||| | ||||| |||| Sbjct 666914 CAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTTCGACCATCCTCTA 666973 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||| || || ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||| Sbjct 666974 GCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATCTTGAA 667033 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || || || ||| || || || || | |||||||||||| || || ||||| | Sbjct 667034 TTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACTTCCAAAGTTATTGTTTTGC 667093 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | || || || ||||||||||| Sbjct 667094 CAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 140 bits (154), Expect = 6e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 |||||| || | || || ||||| || ||||||||||| || ||||| | |||||||| Sbjct 668280 TACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGGCCATCTTC 668339 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | |||||| || || || || | | ||| ||||| || ||||| ||||| |||||||| Sbjct 668340 GAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCTTTGTCTTG 668399 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 || || ||||| || || |||||||| | ||| ||||||||||| ||||| || Sbjct 668400 GATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTTATGGTCTT 668459 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | || ||||| || |||||||| Sbjct 668460 GCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 111 bits (122), Expect = 3e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || || | |||||| || || ||||| || ||||| ||||| || || | Sbjct 666128 TTCCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTG 666187 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||||||| | ||||| ||||| || ||||| | || || ||||| | Sbjct 666188 AAAGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAG 666247 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGAC 68386 | || || || ||||||||||| ||||| ||||| Sbjct 666248 GGATACCCTCTTTGTCTTGAATTTTTGCTTTGAC 666281 >seq12197 Length=2832774 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 ||||||| |||||||||||| ||||| | || ||||||| || | ||||||||||||||| Sbjct 2098797 CGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 2098738 Query 84515 CCCCACATCGGGC 84527 |||||| | |||| Sbjct 2098737 CCCCACGTTGGGC 2098725 >seq10138 Length=660963 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 ||||||| |||||||||||| ||||| | || ||||||| || | ||||||||||||||| Sbjct 86714 CGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 86773 Query 84515 CCCCACATCGGGC 84527 |||||| | |||| Sbjct 86774 CCCCACGTTGGGC 86786 >seq7291 Length=3394451 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 ||||||| |||||||||||| ||||| | || ||||||| || | ||||||||||||||| Sbjct 1073687 CGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1073746 Query 84515 CCCCACATCGGGC 84527 |||||| | |||| Sbjct 1073747 CCCCACGTTGGGC 1073759 >seq3083 Length=3908784 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 ||||||| |||||||||||| ||||| | || ||||||| || | ||||||||||||||| Sbjct 1610 CGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1551 Query 84515 CCCCACATCGGGC 84527 |||||| | |||| Sbjct 1550 CCCCACGTTGGGC 1538 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 26422 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 26481 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 26482 CCCACGTTGGGC 26493 >seq667 Length=1343191 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 ||||||| |||||||||||| ||||| | || ||||||| || | ||||||||||||||| Sbjct 841059 CGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 841000 Query 84515 CCCCACATCGGGC 84527 |||||| | |||| Sbjct 840999 CCCCACGTTGGGC 840987 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 841956 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 841897 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 841896 CCCACGTTGGGC 841885 >seq15004 Length=2377009 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 63979 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 63920 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 63919 CCCACGTTGGGC 63908 >seq6098 Length=5479512 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 1422038 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1421979 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 1421978 CCCACGTTGGGC 1421967 >seq2939 Length=27004647 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 22639560 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 22639619 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 22639620 CCCACGTTGGGC 22639631 >seq138 Length=1774441 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 140241 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 140300 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 140301 CCCACGTTGGGC 140312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921431935210760