Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4472 131 1e-25 seq435 87.8 2e-12 >seq4472 Length=7509737 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || |||||||| | ||| | |||||||||||||| ||||||||||| Sbjct 667120 ATACCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCT 667179 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||| || |||||||| | || ||||||||||| || || Sbjct 667180 GAGAGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGT 667239 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || ||| || ||| | | ||| | ||| || | | ||| Sbjct 667240 GGAATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCA 667299 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || ||||||||||| ||||| || ||||| Sbjct 667300 ACTTCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||||| | || ||||| | || |||||||| || ||||| ||||| Sbjct 668260 ATACCTCCCCTTAGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCT 668319 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||| || || || ||||| | || | ||| || ||||| || Sbjct 668320 GAAAGTGTACGGCCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGG 668379 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| || || |||| | ||||| |||||| ||| ||| Sbjct 668380 GGAATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCA 668439 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || ||||| |||| |||||| ||||| |||||||| Sbjct 668440 ACTTCCAAGGTTATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| | |||||||| | ||| | || || || || ||||||||||| || Sbjct 666892 ATACCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCT 666951 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||| || || ||||| |||||| | || || | |||||| || ||| Sbjct 666952 GAGAGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGA 667011 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| |||||||| || ||| || ||||| | ||||| || || | | ||| Sbjct 667012 GGAATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCT 667071 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | |||||||| |||| ||||| ||||| |||||||| Sbjct 667072 ACTTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227 |||| || || || | |||||||||||||||||||| || || | ||| ||| | Sbjct 668047 CTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAAAGAGTGCGACCA 668106 Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 |||||||||||||| ||||| | || ||||| || || || || ||||| ||||||||| Sbjct 668107 TCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGAATACCTTCTTTG 668166 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || || || ||||| | ||||| || || | | ||| || || | || | Sbjct 668167 TCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACTTCTAGAGTAATT 668226 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || |||||||| |||||||||||||| Sbjct 668227 GTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACG 114223 || ||||| || | ||| | |||||||||||||| ||||| ||||| | | || ||||| Sbjct 667588 AGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGATAAT-GTACG 667646 Query 114224 AGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTC 114283 ||||||||| ||||| || || | || | |||||||||||| || ||||| || || Sbjct 667647 CCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGAATACCCTC 667706 Query 114284 TTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGT 114343 ||| || || ||| |||| | ||| | |||||| | | || || || | || Sbjct 667707 TTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAACTTCTAATGT 667766 Query 114344 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || | |||||| |||||||| ||||| Sbjct 667767 GATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||| | ||| || || | ||||||||||| ||||| ||||| || Sbjct 668488 ATACCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCA 668547 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| |||||| | ||| ||||||||| |||| | | ||| || || || Sbjct 668548 GACAGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGT 668607 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| |||||| ||| | | |||| ||||| | | || Sbjct 668608 GGAATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCA 668667 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | |||||||| || | || || |||||||||||||| Sbjct 668668 ACCTCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCAT 668717 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| | ||| | ||| ||||| | || ||||||||||| || ||||||||| Sbjct 667348 ATACCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCG 667407 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | |||||| | || ||||||||| | || | | ||||| || ||| Sbjct 667408 GACAATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGA 667467 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| || || ||| ||| ||| | | ||||| || || | | || Sbjct 667468 GGGATGCCTTCCTTATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCT 667527 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || ||||| | |||||| |||||||| ||||| Sbjct 667528 ACTTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||||| || || || | || ||||||||||||||||| || || Sbjct 667804 ATACCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCT 667863 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| ||||||||| |||||||| || |||| || | || || || ||| Sbjct 667864 GAAAGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGA 667923 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||| ||||| || ||| | |||| | | |||| || || | | || Sbjct 667924 GGAATTCCTTCCTTGTCTTGGAT-TTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTC 667982 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || || ||||| || ||||||||||| Sbjct 667983 TACTTCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || ||||| || | ||||| || || || ||||| ||||| || || | || || Sbjct 666676 AGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGG 666735 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||| | || || || || |||| ||||| |||||||| |||||||| |||||| Sbjct 666736 CCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCTTCT 666795 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 || || ||||| ||| | | ||||| ||||| | | ||| || || | || Sbjct 666796 TTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTA 666855 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || ||||||||||| || |||||||| Sbjct 666856 ATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 82.4 bits (90), Expect = 6e-11 Identities = 98/132 (74%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || ||||| |||||||||||||| || | || || ||||||| Sbjct 666148 ACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTTCGCCCATCTTCA 666207 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 ||||| || || || | ||||||||||| || || ||||| || || |||||||| | Sbjct 666208 AGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGGATACCCTCTTTGTCTTGA 666267 Query 114294 ATCTTTTGTTTT 114305 || ||||| ||| Sbjct 666268 AT-TTTTGCTTT 666278 >seq435 Length=3082058 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| |||||||||||||||| ||||| | ||| || || || | || ||||| Sbjct 740628 CGTTGATTCTTTTTGAATGTCATAATCTGATAGAGTGCGTTTGTCATCCAACTGCTTACC 740687 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || | || || | ||||| || |||||||| ||||||| || ||| |||||||| Sbjct 740688 CGCAAATATCAGCCTTTGTTGATCTGGAGGAATTCCTTCTTCATCTTGAATTTTTTGTTT 740747 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | | |||||| | || || || || | || | ||||| || ||||| || Sbjct 740748 CACAATATTGATGGTGTCAGACGACTCTACTTCAAGAGTTATTGTTTTTCCAGTCAGGGT 740807 Query 114365 TTTTACAAAAATCTGCAT 114382 |||||||||||| ||||| Sbjct 740808 TTTTACAAAAATATGCAT 740825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420049744625196