Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq546 125 1e-23 >seq546 Length=398126 Score = 125 bits (138), Expect = 1e-23 Identities = 165/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 42607 GGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCA 42666 |||||||||| || || || || ||||||| | || | |||||||||||||||||| | Sbjct 248532 GGCTGTTCAATGCGATCGAAACTTTGCCCTGTGTTAAAAGGAAGGCGGACTGGGCGCTGA 248591 Query 42667 ACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726 |||||||| || | | || | || || || || | || || ||| | ||||| | Sbjct 248592 ACTGGATCAGTAGCACGAATGCTTCCTTTGGAGAAAGAGTTGTTGCATTTGCAGCCGTGG 248651 Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCG 42785 | ||||| || ||||| ||| |||| || || || |||||| | ||| ||| |||| | Sbjct 248652 AAGGCATATTTTTCTCTGGCTCCTTTGCATCTATTTTCTGGTTGAAGAAGAGAGGTCT-T 248710 Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 ||||| || ||||| ||| || ||| | |||||||| || |||| Sbjct 248711 ATGCCTGGTCTCACATTCAGTAATGAATTAATCAGCAGAGATGAGG 248756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944144040500080