Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq4472 104 2e-17 seq3375 98.7 8e-16 seq435 93.3 3e-14 >seq4472 Length=7509737 Score = 104 bits (114), Expect = 2e-17 Identities = 113/149 (76%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||||||||| || || |||| |||||| ||| ||||| ||||||||||| |||| Sbjct 666130 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAA 666189 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | |||| | || || | ||||||||||||||| || || ||||||||||| || Sbjct 666190 AGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGG 666249 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | | |||||||| | | | ||||||||| Sbjct 666250 ATACCCTCTTTGT-CTTGAATTTTTGCTT 666277 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | || || || || |||||||| ||| |||||||||||||||||| |||| Sbjct 666894 ACCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGA 666953 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | ||| | || || | || || || || || || || | ||| ||||| || Sbjct 666954 GAGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGG 667013 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGC 34078 | | ||||| | | | | |||| |||| | || | | ||||| ||| ||| Sbjct 667014 AATTCCTTCTTTAT-CTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTA 667072 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | ||||||||||| || || | |||||||||||| || ||||| Sbjct 667073 CTTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 >seq3375 Length=12126510 Score = 98.7 bits (108), Expect = 8e-16 Identities = 82/98 (84%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| ||||||||||| |||| |||||||||||| ||| |||| |||||||| Sbjct 1996675 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGTAAGGTACGATCCAAGGAACC 1996616 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| ||| ||||| Sbjct 1996615 ATAACTGATTTAATGAGCCATTCGCGGTCTCGCCTTAA 1996578 Score = 98.7 bits (108), Expect = 8e-16 Identities = 82/98 (84%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| ||||||||||| |||| |||||||||||| ||| |||| |||||||| Sbjct 1996675 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGTAAGGTACGATCCAAGGAACC 1996616 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| ||| ||||| Sbjct 1996615 ATAACTGATTTAATGAGCCATTCGCGGTCTCGCCTTAA 1996578 >seq435 Length=3082058 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33904 CCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-A 33962 ||||||| || ||||||| |||||||| || || ||||||| ||||||| | | Sbjct 740602 CCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGA 740661 Query 33963 TTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCAC 34022 || || | ||| ||||| ||||| || ||||||||||| | || ||||| || | Sbjct 740662 GTG-CGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAAT 740720 Query 34023 GCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTC 34082 | |||| || ||||||||| || | | | | | |||| || || ||| Sbjct 740721 TCCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTC 740780 Query 34083 GACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 | |||||||||||||| || || ||||| ||||| || |||||||| Sbjct 740781 AAGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396982393539466