Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4472 149 1e-30 seq13703 89.7 1e-12 >seq4472 Length=7509737 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || | || ||||| | || |||||||||||| || || || | | Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | || || || || || ||||||||||||||| ||| Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| || ||||| |||||||| |||||||| | ||| || | ||| ||| Sbjct 667243 ATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACT 667302 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || |||||||| ||||| ||||| ||||| Sbjct 667303 TCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 138 bits (152), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || || || || ||||||| ||| |||||| || || || ||||| | Sbjct 666438 TCCTCCACGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGA 666497 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || ||||||| ||||||||| || || || || | || ||| ||||| Sbjct 666498 CAATGTTCGACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGA---TCTGG 666554 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | |||||||||||||| || ||||| ||||| ||||||||||| | || || | || Sbjct 666555 GGGGATTCCTTCTTTATCTTGAATTTTAGCTTTGACGTTTTCTATTGTGTCACTGGGCTC 666614 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || | ||||| || || || || |||||||| ||||| || ||||| Sbjct 666615 TACCTCTAAAGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | || | || ||||||| ||| || || || || || ||||| | | Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 666954 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || |||| |||||||| ||||| || || | ||||||| || Sbjct 666955 AGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGA 667014 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||||||||| || ||||| ||||| |||||||| |||| ||| || | ||||||| Sbjct 667015 ATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACT 667074 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || || || || |||| || || || ||||||||||| Sbjct 667075 TCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 134 bits (148), Expect = 3e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | ||| || || | ||| | ||| ||||||||||||||| || |||| Sbjct 667351 CCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGAC 667410 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | || | ||| |||||||| || || || ||||| |||| | ||||| |||| Sbjct 667411 AATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTG---ATCTGGA 667467 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| ||||| ||||| || ||||| |||||||| ||||| || | ||| || | ||| Sbjct 667468 GGGATGCCTTCCTTATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCT 667527 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | || || ||||| ||||| | ||| || || || || |||||| Sbjct 667528 ACTTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| |||||||| | | ||||| || |||||||| || || || || ||| Sbjct 666703 TCCTTTTGGATGTTATAGTCAGATAAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAG 666762 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||| Sbjct 666763 ATCAGACGTTGTTGGTCGGGAGGAATACCTTCTTTATCTTGGATCTTGGCTTTAACATTT 666822 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || | ||| || || | || || || ||||| || ||||| || ||| Sbjct 666823 TCAATAGTGTCACTTGGTTCAACCTCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACG 666882 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 666883 AAGATCTGCAT 666893 Score = 123 bits (136), Expect = 6e-23 Identities = 145/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || ||||| ||||| | || || || || ||||| ||||| || || ||||| Sbjct 668526 TTCTTTCTGAATATTGTAGTCAGACAGGGTACGACCATCTTCCAATTGCTTACCAGCGAA 668585 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| ||| | ||| ||||||||||| |||||||| || |||||||| || Sbjct 668586 GATCAACCTCTGCTGATCAGGTGGAATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATT 668645 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || | || || || || ||||| || || || || | ||||| || Sbjct 668646 CTCAATCGTGTCACTAGGCTCAACCTCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAAC 668705 Query 288462 GAATATCTGCATTATG 288477 || ||||||||| || Sbjct 668706 AAAAATCTGCATTTTG 668721 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 || || | ||| ||||| | || |||||||||||| ||||| || | | || || Sbjct 667588 AGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGATAATGTACGC 667647 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| | ||||| || || || || | ||||||||| | ||| || || ||| Sbjct 667648 CCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGAATACCCTCT 667707 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||| |||||||| || || || |||||||| | || || | || ||||| | ||| Sbjct 667708 TTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAACTTCTAATGTG 667767 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || | ||| ||||| || || ||||| Sbjct 667768 ATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 >seq13703 Length=2289824 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||||||||| ||||| ||||| || ||||| || | ||| | || || Sbjct 2087082 ATACCTTCTTTATCCTGAATTTTAGCTTTTACATTTTCAATGGTATCAGACTGCTCAACC 2087141 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 2087142 TCAAGTGTGATGGTCTTCCCAGTCAGAGTTTTTACGAAAATCTGCAT 2087188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179404514914374