Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1840 113 1e-19 >seq1840 Length=586137 Score = 113 bits (124), Expect = 1e-19 Identities = 322/487 (66%), Gaps = 16/487 (3%) Strand=Plus/Minus Query 297248 TCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCA 297307 ||| |||||||||| || || ||||| ||| || ||||| || || | ||| Sbjct 358259 TCTCTTGGATTGTAGTTATAAATCTTAGTACTCCATCCAGTACCAATACCTTCAGCTCCA 358200 Query 297308 TTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCA 297367 || || |||| | || |||| ||| ||||||||||| ||||| || || | ||| Sbjct 358199 TTGACAAGAACCATAGGGATAATAGGTACATAATACTCAGGTTCAATTTTCAAATTATCA 358140 Query 297368 TCATACAGAT-ATTTC--AGAAGATTATCGTCCGTATCGACGAAAACC--TGTCGAGTCT 297422 ||||| |||| |||| ||| || |||| || | ||||||| ||| || Sbjct 358139 TCATAGAGATTATTTAGGAGAGGAGTATC-----TAAAGCCGAAAACAAATGTTTGGTAA 358085 Query 297423 GAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATC 297482 || ||| |||||||||||||| | || || || ||| ||||| || || | | Sbjct 358084 TGGGACTCAAATTTGTGAAAATATACCTCGCGCTGGCAGCATCTTTACCGCCTTGTAGAC 358025 Query 297483 TCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCT 297542 | ||| ||||| || || ||||| || ||||| ||||| || ||| ||| | Sbjct 358024 GAGTACCAAACTGTCCAATTGGTAACAAGATATTTATGTTGTTGCTGCCAACAAAATTTT 357965 Query 297543 GTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCT 297602 | || | | ||| || ||| |||| |||||| ||||| || || || ||||| Sbjct 357964 GGGCCAAACCTATGATTGTTCCTGTAAGAGCTGCTTCACCATGATGGTACGCTGAATGCT 357905 Query 297603 CTGCAACGTAACC-GCTGAACTGTGCAACCTTCACGTCGGTCGTCAA--ATTGCGCTTGA 297659 | ||||| |||| ||| | ||| || || ||||| || |||| | ||| | ||| | Sbjct 357904 CAGCAACTGAACCAGCT-AGCTGAGCCACTTTCACTTC--TCGTTTATCATTTCTCTTAA 357848 Query 297660 AAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGC 297719 | | || | ||||| || || ||||| ||||||||||| | || ||||| Sbjct 357847 CACAAGTGTAAAGAACTTTACGCTGTCCTGGTTTTAAACCATCAACCATAGATGGAATAG 357788 Query 297720 TTCGTTC 297726 |||||| Sbjct 357787 ATCGTTC 357781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102646377963550