Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq4472 152 5e-32 seq435 136 4e-27 seq14474 105 7e-18 >seq4472 Length=7509737 Score = 152 bits (168), Expect = 5e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || ||||||||||| ||||| ||||||| | || ||| | |||||| Sbjct 667597 ACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGATAATGTACGCCCATCTTCA 667656 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||| ||||||||| |||| | ||||| ||||| || ||||| || ||||| ||||| Sbjct 667657 AGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGAATACCCTCTTTATCTTGG 667716 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 |||||| ||||||| || | || |||| | || ||||||| || | ||| || Sbjct 667717 ATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAACTTCTAATGTGATGGTTTTT 667776 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||||||| || ||||||||||| Sbjct 667777 CCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 147 bits (162), Expect = 2e-30 Identities = 148/187 (79%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || ||||| |||||||||||||| |||| | ||| ||| | ||| Sbjct 666145 AGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTTCGCCCATCT 666204 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| |||||||||||| ||||||| |||||||| |||||||| || || ||||| ||| Sbjct 666205 TCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGGATACCCTCTTTGTCT 666264 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCAC-CGGCGTCCACTTCTACAGTTACGG 64409 || | |||||||||| ||| || | ||||||| | || || ||||||| ||| | | Sbjct 666265 TG-AATTTTTGCTTTGACATTTTCAATAGTATCACTCTGC-TCAACTTCTAAAGTAATTG 666322 Query 64410 TCTTGCC 64416 ||||||| Sbjct 666323 TCTTGCC 666329 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || ||||||||||| ||||||||||||| || ||| || | |||||| Sbjct 667141 ACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAGAGGGTTCGGCCATCTTCA 667200 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| || ||| |||| || ||||| || ||||| ||||| ||||| || ||||| Sbjct 667201 AGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATACCTTCCTTATCTTG- 667259 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||| ||||| ||| || | ||||||| | || ||||||| || | || || Sbjct 667260 AATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACTTCTAGTGTAATAGTTTT 667319 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||| |||||| || || |||||||| Sbjct 667320 TCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||||||| || || | ||| | || ||||||||||| || |||||||| | Sbjct 667350 ACCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGA 667409 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | |||||| || || |||| | || || || || ||||| Sbjct 667410 CAATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGG 667469 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || ||||| || ||||| | |||||||||| ||| || | |||||||| | || | Sbjct 667470 GATGCCTTCCTTATCTTG-AATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTA 667528 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||||| ||||| |||||| ||||| |||||||| || |||||||||||| Sbjct 667529 CTTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| || || | ||| | || |||||||| || ||||| ||||||| | || || | Sbjct 668274 TCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGGCC 668333 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| ||||||||||| ||| |||| | || |||||||| || ||||| |||||||| Sbjct 668334 ATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCTTT 668393 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 ||||| ||||| ||||||| || | || |||| || || ||||| | |||| Sbjct 668394 GTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTTAT 668453 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| ||||||||||| || || || ||||| Sbjct 668454 GGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || ||||| | |||| || ||||||||||||||||| || || | Sbjct 668034 ACCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGA 668093 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | |||||||| || || || ||| |||| || || ||||| || || || Sbjct 668094 AAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGG 668153 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| ||||| |||||| || | |||||||| | || || Sbjct 668154 AATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAAC 668213 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||| | ||||| || || | |||||| || ||||| ||||| Sbjct 668214 TTCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||| || | || ||||||| || || || || ||||||||||| |||| Sbjct 666894 ACCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGA 666953 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || | || || ||||| || || || |||| || | ||| || |||||||| Sbjct 666954 GAGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGG 667013 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||||||| ||||| ||||| ||||| || | ||||||| | || || Sbjct 667014 AATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTAC 667073 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||||| || ||||| ||||| ||||| || || || ||||| Sbjct 667074 TTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| || || || ||||||| || |||||||| || |||||||| |||| Sbjct 666439 CCTCCACGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGAC 666498 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | ||||| || || || |||||| |||| |||| ||||| || || || Sbjct 666499 AATGTTCGACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGG 666558 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||||| ||||| | |||| ||||| || || | ||| |||| || || || Sbjct 666559 ATTCCTTCTTTATCTTG-AATTTTAGCTTTGACGTTTTCTATTGTGTCACTGGGCTCTAC 666617 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||| | || || || || | ||| || |||||||||||||| Sbjct 666618 CTCTAAAGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||||||||| || |||| | ||||| | ||||||||||| || || Sbjct 667837 GTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCATCTTCAAGCTGTTTACCT 667896 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||| || |||||||||||||| || ||||| | |||| ||||| Sbjct 667897 GCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGGA-TTTTGGCTTT 667955 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | ||||||| | || ||||||| || | || || || || | || Sbjct 667956 AACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGATAGTTTTACCAGTAAGTGT 668015 Query 64426 TTTTACGAAAATTTGCAT 64443 ||| |||||||| ||||| Sbjct 668016 TTTGACGAAAATCTGCAT 668033 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| ||||| | || || || ||||| ||||| || || | | |||||| | ||||| Sbjct 666684 CACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGGCCATCTTC 666743 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 | |||||| |||||| | || || || || |||||||||||||| |||||||| ||||| Sbjct 666744 TAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCTTCTTTATCTTG 666803 Query 64354 TATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412 | | || ||||| ||| || | || |||| | || || |||| ||| | || | Sbjct 666804 GA-TCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTAATAGTTT 666862 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || || | |||||||||||| || ||||| Sbjct 666863 TCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| || || | |||| || |||||||| ||||| ||||| || | Sbjct 668490 ACCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGA 668549 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | ||||| | ||||| || || | || | || |||||| || || || Sbjct 668550 CAGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGG 668609 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 |||||||||||| || || | | |||||||| ||| ||| | || |||| | || | Sbjct 668610 AATTCCTTCTTTGTCCTGGA-TCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAA 668668 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | |||| || | || ||||| || || || || || ||||| |||||||| Sbjct 668669 CCTCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATTTT 668720 >seq435 Length=3082058 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64219 GCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGAC 64278 ||| | ||| | ||||| | |||| ||| |||||||||||||||| ||||||| | Sbjct 740601 GCCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAG 740660 Query 64279 GGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 ||||| ||| || | |||||| || ||| | || |||| || || || |||||||| Sbjct 740661 AGTGCGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAAT 740720 Query 64339 TCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTC 64398 |||||||| ||||| |||||||| || |||| | | || ||| | || ||||| Sbjct 740721 TCCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTC 740780 Query 64399 TACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | ||||| || || || |||| |||||||| ||||| |||||||| Sbjct 740781 AAGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 >seq14474 Length=2471489 Score = 105 bits (116), Expect = 7e-18 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 154623 CTGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGA 154682 || |||| |||| ||| | |||||| || |||||| ||| || || ||||||| || Sbjct 1693987 CTATATTCAACAACTTCAGTGCACAAGTTGCTGCATTTAATTGTACCTAGGTTTTGTTGG 1694046 Query 154683 TTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGG 154742 || ||||| ||||||| |||||||||||||| ||||| || || || || ||| ||| Sbjct 1694047 TTAGATTTTCTGTTGCAAGCGTCTTTGTACAACATGTAAGGAGTTCCTGTCTCCGTTTGT 1694106 Query 154743 GTTTCAATAATTG 154755 | ||||||||||| Sbjct 1694107 GATTCAATAATTG 1694119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499541542156520