Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq4472 111 1e-19 >seq4472 Length=7509737 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || |||| | |||||||| | || || |||||||| |||||||||||| | Sbjct 667351 CCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGAC 667410 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| |||| ||| || |||||| | ||||| | || ||||| ||||| Sbjct 667411 AATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGG 667470 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||| | | ||| ||| ||| || | | ||| | || || || ||| || Sbjct 667471 ATGCCTTCCTTAT-CTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTAC 667529 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || || ||||| | |||||| |||||||| ||||| Sbjct 667530 TTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || | ||| || | ||| | || ||||| || ||||| ||||| || Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 666954 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| |||||||||||||||||| | || | || ||| ||||||||||| Sbjct 666955 AGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGA 667014 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || || | | ||| ||| || || | | ||| | || || || || || Sbjct 667015 ATTCCTTCTTTAT-CTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTAC 667073 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | |||||||| |||| ||||| ||||| |||||||| Sbjct 667074 TTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||| | ||||||||| || | || || ||||||||||| || || || Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || |||||||| || || |||| | | |||||||| ||||| Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || |||||||| |||||| |||| | ||| || | || || || ||| | Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTT-GGCTTTAACGTT-CTCAATAGTATCACTAGGCTCTA 667984 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | || | ||||| || || || ||||| || ||||||||||| Sbjct 667985 CTTCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | ||||| ||||| ||||||||||| || || || ||| ||| || Sbjct 668509 ACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGACAGGGTACGACCATCTTCC 668568 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | || || |||||| ||||||| | ||||||||| || || || || || |||||| | Sbjct 668569 AATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGAATTCCTTCTTTGTCCTGG 668628 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| || | | || | ||||| || ||| || || | || | ||||| Sbjct 668629 ATCTT-TGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACCTCTAGTGTGATAGTTTT 668687 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || | || || |||||||||||||| Sbjct 668688 GCCAGTTAATGTCTTAACAAAAATCTGCAT 668717 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | || | || |||||| || | ||||| ||||||||||| || || || Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || || ||||||||||| | |||| || |||||||| || || Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || ||||| |||||| || | | ||| | || || | || ||| Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || |||||||| |||||||||||||| Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | | ||| |||| ||| | ||||| |||||||| || |||||||| Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| | |||| ||||| |||||||| || Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| ||| |||| | | ||| | ||| || | || || Sbjct 667243 ATACCTTCCTTATCT-TGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAAC 667301 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || ||||||||||| ||||| || ||||| Sbjct 667302 TTCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475402531815920