Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4472 129 5e-25 seq435 125 6e-24 >seq4472 Length=7509737 Score = 129 bits (142), Expect = 5e-25 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | |||||||| || ||||||| || ||||| |||||||| |||||||| Sbjct 667576 ATTCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATC- 667634 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| || | ||||| || || | || || || || ||||| | Sbjct 667635 -TGATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAG 667693 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| || ||||||||||| |||||| || | ||||| |||||| || || Sbjct 667694 GTGGAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCT 667753 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | || | ||||| || |||| |||||| |||||||||||||| Sbjct 667754 CAACTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 125 bits (138), Expect = 6e-24 Identities = 168/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| || ||||||| || ||||| || || ||||| || || || || || || Sbjct 666436 ATTCCTCCACGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTC- 666494 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| | || || ||| || | ||||||||| || | || | | |||||| || | Sbjct 666495 -TGACAATGTTCGACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTG 666553 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || || |||||||||||||||||||| ||||| ||||| ||||| | || Sbjct 666554 GGGGGATTCCTTCTTTATCTTGAATTTTAGCTTTGACGTTTTCTATTGTGTCACTGGGCT 666613 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || | ||| | ||||| || |||||||| || || ||||||||||| Sbjct 666614 CTACCTCTAAAGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || || ||||| ||||||||||| |||||| | ||| | ||| || || || Sbjct 667374 ATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCCATCTTCTAACTG 667433 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || ||| | ||||| | ||| || || || || |||||||| |||||||||||||| Sbjct 667434 CTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTTATCTTGAATTTT 667493 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | ||| | ||| | || || || ||| ||||| | ||| | || || ||||| Sbjct 667494 TGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTATGGTCTTTCCGGT 667553 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || |||||| |||||||||||||| Sbjct 667554 TAAAGTTTTCACAAAAATTTGCAT 667577 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | |||||||||||| ||||| | ||||| ||||||||||| ||||| || Sbjct 666664 ATGCCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCA 666723 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || || || || || || | |||| ||||| ||||| || Sbjct 666724 GATAAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGA 666783 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||||||||| || || ||| | ||| | ||||| | || Sbjct 666784 GGAATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCA 666843 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| ||||| || |||||||||||||| || || ||||| Sbjct 666844 ACCTCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||||||| || ||||| || || ||||| |||||||| || ||||| Sbjct 667120 ATACCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCT 667179 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || |||| ||| || | || || || || | |||| || || || || || Sbjct 667180 GAGAGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGT 667239 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| |||||||||||||| ||| | ||||| ||| || | || Sbjct 667240 GGAATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCA 667299 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| ||||| || || |||||||| ||||| |||||||| Sbjct 667300 ACTTCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 ||||| ||| | || || || ||||| ||||| || ||||| || | || | Sbjct 668046 CCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAAAGAGTGCGACC 668105 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||||||||| || | |||| |||||||| || || ||||| |||||||| Sbjct 668106 ATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGAATACCTTCTTT 668165 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| ||||| ||| | ||| | || || | || ||||| ||||||| Sbjct 668166 GTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACTTCTAGAGTAAT 668225 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| |||||||| ||||| Sbjct 668226 TGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || | |||||| || ||||| || || || ||||| || || || || || Sbjct 666892 ATACCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTC- 666950 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| || || || ||| || | |||||||| ||| | || | || || || || | Sbjct 666951 -TGAGAGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGG 667009 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| |||||||||||||||||||| ||| | ||| | || || || | Sbjct 667010 GAGGAATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTT 667069 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | ||| | |||||||| || | ||||| ||||| || ||||| Sbjct 667070 CTACTTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 >seq435 Length=3082058 Score = 125 bits (138), Expect = 6e-24 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATC-GCT-GACGGTTTTAGAATCGTCCAATT 45195 || ||||||||||| ||||| || | |||||| | | || | || | || ||||| | Sbjct 740623 TGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGAGTGCGTTTG--TCATCCAACT 740680 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 | || || || |||||| | ||| || || || ||||| ||||||| ||||||||||| Sbjct 740681 GCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATTCCTTCTTCATCTTGAATTT 740740 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 ||||||| | | | |||||| || ||||| ||||| ||||| | ||||| || | Sbjct 740741 TTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCAAGAGTTATTGTTTTTCCAG 740800 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | || |||||||||||||| ||||| Sbjct 740801 TCAGGGTTTTTACAAAAATATGCAT 740825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451909787888680