Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4472 118 2e-21 >seq4472 Length=7509737 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || |||| ||||| || | || ||||||||||||| ||| ||||||| || || | Sbjct 666676 AGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGG 666735 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| | |||||| ||||| ||||| ||||| || ||||| ||| ||| |||||| Sbjct 666736 CCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCTTCT 666795 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || ||||| || || ||| | ||||| ||| ||| || || || || Sbjct 666796 TTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTA 666855 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || |||||||| || || || || Sbjct 666856 ATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTG 666890 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || ||||||||||| || || || || || || || | ||||||||| | ||| || Sbjct 666445 CGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGACAATGTT 666504 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || |||||||| || || || | ||||| || || |||||| Sbjct 666505 CGACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCCT 666564 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || ||||| ||| || || ||| ||| | ||||| | | ||||| || || Sbjct 666565 TCTTTATCTTGAAT-TTTAGCTTTGACGTTTTCTATTGTGTCACTGGGCTCTACCTCTAA 666623 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || ||||| || || |||||||| Sbjct 666624 AGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTG 666662 Score = 107 bits (118), Expect = 5e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| ||||| || || || |||||||| || | ||||||||| | | || | ||| Sbjct 666907 CTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTTCGACCA 666966 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 || || ||||| ||||| ||||| || || | ||| || || ||| |||||||||| Sbjct 666967 TCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTA 667026 Query 199535 TCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||| ||| |||| ||| ||| | || || | | |||||| ||||| || || Sbjct 667027 TCTTGAAT-TTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACTTCCAAAGTTAT 667085 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || | ||||||||||| || || Sbjct 667086 TGTTTTGCCAGTCAATGTTTTCACAAATATCTG 667118 Score = 104 bits (114), Expect = 6e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||||| || || || ||||||| ||||| || | ||| || ||||| Sbjct 667362 TCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCC 667421 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | |||||| || ||||| || | | || || || ||| || ||||| Sbjct 667422 ATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTT 667481 Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 || ||||| |||||| ||||| ||| | || || | | ||||| || || || | Sbjct 667482 ATCTTGAAT-TTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTA 667540 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || || | |||||||||||||||||| Sbjct 667541 TGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTG 667574 Score = 104 bits (114), Expect = 6e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || |||| ||||| || | ||| || || ||||||| ||| || || | || || | Sbjct 667588 AGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGATAATGTACGC 667647 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| ||||| || ||||| || || | |||||| ||||| || ||| || ||| Sbjct 667648 CCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGAATACCCTCT 667707 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || || ||| ||| || ||| | |||||| | | || || || || ||| Sbjct 667708 TTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAACTTCTAATGTG 667767 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || | |||||| ||||||||||| Sbjct 667768 ATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTG 667802 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/125 (76%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || |||||||| | ||||||||| | | || | |||||||| || ||| Sbjct 666154 TGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTTCGCCCATCTTCAAGTTGC 666213 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||| || |||||||||||||| || ||| || || ||| || ||||| ||| Sbjct 666214 TTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGGATACCCTCTTTGTCTTGAAT-TTT 666272 Query 199547 TGCTT 199551 ||||| Sbjct 666273 TGCTT 666277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178671870142711