Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq4472 104 2e-17 >seq4472 Length=7509737 Score = 104 bits (114), Expect = 2e-17 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACG--CGTTCAT 39565 ||||||||||||||||| |||||| ||||| |||||||| | ||| | || ||| Sbjct 668278 AGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTG--AAAGTGTACGGCCAT 668335 Query 39566 CGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGT 39625 | || | || || || ||||||||||||| ||||| || | ||| | |||||||||| Sbjct 668336 CTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCTTTGT 668395 Query 39626 CGCATATTTT-TTGTTTA-ATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAAT 39683 | ||||| |||| || || | ||| ||| | ||| || ||||| || || Sbjct 668396 CTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGG--TTCAACTTCCAAGGTTAT 668453 Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || || |||||||| || ||||||||||| Sbjct 668454 GGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||| | ||| ||||| || | || ||||||||| || ||||| || | Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| |||| || | |||||| || ||||||| | ||| |||||||| | || Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| ||||| ||| | | | | ||| || ||| || Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | ||||||||| || || |||| |||||| || || |||||||| Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || | || ||| | ||||||||| ||||||||| || |||||||| | Sbjct 667579 CCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGAT 667638 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || || |||| || | ||||| ||| |||||||||||||||| || || | || Sbjct 667639 AATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGA 667698 Query 39613 ACGCCTTCTTTGTCGCATATTTTT-TGTTTA-ATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | || ||||| || |||||| |||| || || | ||| || || || | Sbjct 667699 ATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGC--TCAA 667756 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || || || || ||||| || ||||||||||| || || || ||||| Sbjct 667757 CTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588 || ||||| || ||||| || | || ||| |||| || || || |||||| |||| Sbjct 666703 TCCTTTTGGATGTTATAGTCAGATAAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAG 666762 Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCG 39646 || | ||| || || || | || | |||||||| || || || ||||| | Sbjct 666763 ATCAGACGTTGTTGGTCGGGAGGAATACCTTCTTTATCTTGGATCTTGGCTTTAACATTT 666822 Query 39647 TCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTA 39706 || || ||| || | ||| || || |||||||| ||||| || |||| |||||||| Sbjct 666823 TCAATAGTGTCACTTGG--TTCAACCTCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTA 666880 Query 39707 CGAAGATCTGCAT 39719 ||||||||||||| Sbjct 666881 CGAAGATCTGCAT 666893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347299606436789