Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4472 152 1e-31 seq435 132 1e-25 seq11726 96.9 8e-15 >seq4472 Length=7509737 Score = 152 bits (168), Expect = 1e-31 Identities = 167/221 (76%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || |||||||| || || || || || |||||||| || |||||||| | || |||| Sbjct 667132 AGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAGAGGGTTCGG 667191 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| ||||||||||| || || || || || ||||| || || ||||| ||||| Sbjct 667192 CCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATACCTTCC 667251 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 || ||||||||||| || || || || ||||| || ||| ||| ||||| || Sbjct 667252 TTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATC---ACTTGGTTCAACTTCTAGT 667308 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || |||||||||| |||||| || || | |||||| Sbjct 667309 GTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 152 bits (168), Expect = 1e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | || || ||||| |||||||| ||||||||||||| | ||||| || Sbjct 667362 TCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCC 667421 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | ||||||||| ||||| || | | |||||| |||||||| |||||||| || Sbjct 667422 ATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTT 667481 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||||||||| || || || ||||| || || | || ||||| | || | Sbjct 667482 ATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTAT 667541 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||||| || |||||||| || || | ||||||| Sbjct 667542 GGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||||||||| ||||| |||||||| || ||||| ||||| || | || |||| ||| Sbjct 666907 CTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTTCGACCA 666966 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 || || ||||| || || ||||| ||||||| ||||| || |||||||| |||||||| Sbjct 666967 TCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTA 667026 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 ||||||||||| || ||||| ||||| || || | ||| ||||| | || | Sbjct 667027 TCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACTTCCAAAGTTATT 667086 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| ||||| || || | ||||| Sbjct 667087 GTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || | ||| |||||||| ||||||||||| || || || | |||||| | ||| Sbjct 667819 CTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCA 667878 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| ||||| |||||||| |||||||| | ||| || || |||||||| ||||| ||| Sbjct 667879 TCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTG 667938 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 ||||| ||||| || ||||||||||| || || | || ||||| | || | Sbjct 667939 TCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGATA 667998 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || | ||||| ||||| | ||||| Sbjct 667999 GTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 140 bits (154), Expect = 7e-28 Identities = 166/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 || ||||| | || | || | ||| || ||||| || || || ||||| | ||| || Sbjct 668269 CTTAGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTA 668328 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||||||||||||||||| || || || || | ||||| ||||| || ||||| ||| Sbjct 668329 CGGCCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCT 668388 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 ||||||||||| ||||| ||| || || ||||||||||| ||| ||| ||||| Sbjct 668389 TCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTC---ACTGGGTTCAACTTCC 668445 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||| | ||||| || ||||||||||| || || | ||||| Sbjct 668446 AAGGTTATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 132 bits (146), Expect = 1e-25 Identities = 165/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| ||||| ||||| || | || ||||| ||||| || || || || | | || Sbjct 666672 TCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGT 666731 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||| || || ||||| || ||||||||||| |||||||| || Sbjct 666732 GCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACC 666791 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 |||||| ||||| || || || || || ||||| ||||| ||| ||| || || Sbjct 666792 TTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTC---ACTTGGTTCAACCTC 666848 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||| || || ||||| | |||||||||||| | ||||| Sbjct 666849 TAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 125 bits (138), Expect = 2e-23 Identities = 137/181 (76%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||||||||| || |||||||| ||||| || | ||| |||| ||||||||| || ||| Sbjct 666154 TGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTTCGCCCATCTTCAAGTTGC 666213 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || || || || || || || ||||| || || |||||||||||||||||| Sbjct 666214 TTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGGATACCCTCTTTGTCTTGAATTTTT 666273 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||||| || ||||| || || ||| || ||||| | |||| ||||| ||| Sbjct 666274 GCTTTGACATTTTCAATAGTATC---ACTCTGCTCAACTTCTAAAGTAATTGTCTTGCCT 666330 Query 195115 G 195115 | Sbjct 666331 G 666331 Score = 123 bits (136), Expect = 6e-23 Identities = 159/218 (73%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 |||| || | |||||| || || ||||||||||| || || || | |||||| | ||| Sbjct 668047 CTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAAAGAGTGCGACCA 668106 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| || || || || || || || || ||||| || || || ||||| ||||||||| Sbjct 668107 TCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGAATACCTTCTTTG 668166 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTA 195102 ||||| ||||| || || || ||||| || || ||| ||| ||||| || ||| Sbjct 668167 TCTTGGATTTTAGCTTTTACATTTTCAATTGTATC---ACTTGGTTCAACTTCTAGAGTA 668223 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | |||||| || || | ||||| Sbjct 668224 ATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 120 bits (132), Expect = 7e-22 Identities = 160/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || |||| ||||| ||||| ||||| ||||| || || ||||| || | | |||| Sbjct 666448 AGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGACAATGTTCGA 666507 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || || || || || || ||||| | ||| || ||||| || || |||||| Sbjct 666508 CCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCCTTCT 666567 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 || ||||||||||| |||||||| || || ||||| ||| || || || | Sbjct 666568 TTATCTTGAATTTTAGCTTTGACGTTTTCTATTGTGTC---ACTGGGCTCTACCTCTAAA 666624 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || |||||||| | ||| || ||||| | |||||| Sbjct 666625 GTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 111 bits (122), Expect = 3e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | |||||| || || ||||| ||||||||||| || | || || Sbjct 668496 TCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGACAGGGT 668555 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||||| |||||||| | | || || || || ||||| || Sbjct 668556 ACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGAATTCC 668615 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || || ||| || || |||||||| ||||| | || || || || Sbjct 668616 TTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACCTCTAG 668675 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | || || || || || || || || || | ||||||| Sbjct 668676 TGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATTT 668719 >seq435 Length=3082058 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || || ||||||||||| | ||||| | ||||| | || || | ||| Sbjct 740622 GTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGAGTGCGTTTGTCATCCAACTG 740681 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || || || || | |||||| ||||||||||| ||||||| ||||||||||| Sbjct 740682 CTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATTCCTTCTTCATCTTGAATTTT 740741 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || | | |||||||| || || |||||||| || | || ||||| || Sbjct 740742 TTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCAAGAGTTATTGTTTTTCCAGT 740801 Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142 || |||||||| || | ||||||| Sbjct 740802 CAGGGTTTTTACAAAAATATGCATTT 740827 >seq11726 Length=1646561 Score = 96.9 bits (106), Expect = 8e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | || | ||| |||||||| |||||||||||||||| || || Sbjct 660149 TCTAAGTCTGAGTACTAAATGTAAAGTAGACTCTTTCTGAATATTGTAATCGGATAGTGT 660090 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || ||||||||| | ||| || || || ||||| | ||| |||||||| || ||||| || Sbjct 660089 TCGCCCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCC 660030 Query 195039 T 195039 | Sbjct 660029 T 660029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109246579552811