Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq4472 176 4e-39 seq435 170 2e-37 seq13703 93.3 3e-14 seq11726 87.8 1e-12 seq8847 82.4 6e-11 >seq4472 Length=7509737 Score = 176 bits (194), Expect = 4e-39 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| | ||| || |||||||||||||| || |||||||| | || |||| | |||| Sbjct 667138 AAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAGAGGGTTCGGCCATCT 667197 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | |||||||| ||||| |||| ||||||||||||||| ||||| ||||| |||||| Sbjct 667198 TCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATACCTTCCTTATCT 667257 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 |||||||| ||| ||| |||||| || ||| | ||| ||||| || || | ||| Sbjct 667258 TGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACTTCTAGTGTAATAGTT 667317 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | |||||| |||||||| ||||| Sbjct 667318 TTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 168 bits (186), Expect = 5e-37 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATC 101316 || ||| ||||| ||||| ||||||||||| ||||||||||||| | ||||| |||| Sbjct 667365 TAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCCATC 667424 Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376 || || |||||||| || || ||||| | |||||||| || || |||||||| ||||| Sbjct 667425 TTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTTATC 667484 Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGT 101436 |||||||||| ||| ||| |||| | || ||| | || ||||| | ||| | || Sbjct 667485 TTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTATGGT 667544 Query 101437 TTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || |||||||||||||| ||||| || ||||| Sbjct 667545 CTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | || ||| || ||||| ||||||||||| || |||||||| || | Sbjct 668491 CCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAC 668550 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||||||||||||| || || ||||| | ||| ||||| || ||| Sbjct 668551 AGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGA 668610 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| || || || ||| ||| ||| | || | |||||| | || || Sbjct 668611 ATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACC 668670 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| |||||||| ||||| || || ||||| |||||||| Sbjct 668671 TCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCAT 668717 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | | || || | ||| | |||||||||||||| || || ||||| | Sbjct 667577 TTCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTG 667636 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| || | || || || ||||| || ||||||||||| || || | Sbjct 667637 ATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTG 667696 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || ||||||||||| |||||| |||||| |||||| |||||| | || | Sbjct 667697 GAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAA 667756 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | |||| ||||| || ||||||||||| ||||| || ||||| Sbjct 667757 CTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| | |||||| || || || || || || ||||| || | || |||| |||| Sbjct 666910 AAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTTCGACCATCC 666969 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | || || || || || || | | |||||||||||| ||||| |||||||||||| Sbjct 666970 TCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATCT 667029 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 |||||||| |||||| |||| | ||| ||| | ||| ||||| | ||| | ||| Sbjct 667030 TGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACTTCCAAAGTTATTGTT 667089 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || ||||| |||||||||||||| Sbjct 667090 TTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | | || || ||||| |||||||||||||| || || || || | Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | ||| || || ||||| |||| ||| || ||||| || ||| Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||| ||||| ||||||| |||| | || ||| | ||| ||| Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | || || || |||| |||||| ||||| |||||||| Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | | || || | ||| | || || || ||||| || || || || | Sbjct 666667 CCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGAT 666726 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || || ||||| || ||||| |||| ||| ||||| ||||| ||| Sbjct 666727 AAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 666786 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||| || || ||| ||| |||| | ||||||| | ||| || Sbjct 666787 ATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACC 666846 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | ||||| || |||| ||||||||| || |||||||| Sbjct 666847 TCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 127 bits (140), Expect = 2e-24 Identities = 158/215 (73%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 101228 ATATACTAGACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGT 101287 |||||| ||||| |||||||| | ||| | || |||||||| || ||||| ||||| Sbjct 666116 ATATACCTTACATT-CCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGA 666174 Query 101288 ATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGC 101347 || ||||| || | | |||| |||| || | |||||| || ||||| || | |||| Sbjct 666175 ATGTTGTAGTCTGAAAGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGC 666234 Query 101348 TGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTG 101407 || |||||||| || || || ||||| |||||||||||| ||| ||| |||| | ||| Sbjct 666235 TGCTGATCGGGAGGGATACCCTCTTTGTCTTGAATTTTTGCTTTGACATTTTCAATAGTA 666294 Query 101408 TCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| | || ||||| | ||| | || ||||| Sbjct 666295 TCACTCTGCTCAACTTCTAAAGTAATTGTCTTGCC 666329 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || |||||||| ||||| ||||| || | | |||| |||| || | ||| Sbjct 666462 ATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGACAATGTTCGACCATCTTCTAGTTG 666521 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| || | | || ||||| || || || |||||||||||||||||||| Sbjct 666522 TTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCCTTCTTTATCTTGAATTTT 666581 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| || |||||| |||||| | || || || | ||||| ||||| || || Sbjct 666582 AGCTTTGACGTTTTCTATTGTGTCACTGGGCTCTACCTCTAAAGTGATAGTTTTTCCTGT 666641 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 || ||| || || || || |||||| Sbjct 666642 TAGAGTCTTAACGAAAATTTGCATG 666666 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | || || || || || || ||||||||||| || || || || | Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | || ||||||||||| || | | || ||||| || ||| Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| ||||| ||| || | || | ||| ||| | || ||| Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACT 667986 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| ||||| || || | ||||| || || |||||||| Sbjct 667987 TCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 >seq435 Length=3082058 Score = 170 bits (188), Expect = 2e-37 Identities = 172/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 101246 CCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATA 101305 ||||| ||||||| || | ||||| || ||||||||||| || | ||||| | | | Sbjct 740602 CCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGA 740661 Query 101306 GTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATG 101365 || | || ||||| |||||||| |||||||||| | |||||||| || ||||| Sbjct 740662 GTGCGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATT 740721 Query 101366 CCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCA 101425 ||||||| |||||||||||||||||| ||||| | | |||||||||| || |||||| Sbjct 740722 CCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCA 740781 Query 101426 AGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | ||||| || || | ||||||||||| || ||||| Sbjct 740782 AGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCAT 740825 >seq13703 Length=2289824 Score = 93.3 bits (102), Expect = 3e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || ||||| | |||||||||||| |||||||| ||||| || || ||||| | Sbjct 2085161 CCACCCCTCAAACGAAGAACTAAATGAAGAGTAGATTCCTTTTGAATGTTATAATCTGAT 2085220 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| ||||| || || || ||||| || || | |||||||| || ||| Sbjct 2085221 AGAGTTCGTCCATCTTCCAACTGTTTGCCGGCAAAAATTAATCTTTGTTGATCAGGGGGA 2085280 Query 101363 ATGCCT 101368 || ||| Sbjct 2085281 ATACCT 2085286 >seq11726 Length=1646561 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||||||| | ||||| ||||| || ||||||||||||| | |||| |||| ||| Sbjct 660136 ACTAAATGTAAAGTAGACTCTTTCTGAATATTGTAATCGGATAGTGTTCGCCCATCTTCC 660077 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCT 101368 || || || || ||||| ||||| |||||||| || || ||||| ||| Sbjct 660076 AACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCT 660029 >seq8847 Length=10843265 Score = 82.4 bits (90), Expect = 6e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 13626 TATTTTTATTAATGTAACAATCTATATTGAATTTTCGTTTACAACCTTCAAAATTCATGT 13685 ||| ||| || ||||| | || | || ||||||| || || |||| ||| |||||| Sbjct 8059858 TATATTTTTTTATGTATCCATTCACATCAAATTTTCTTTGGCAGCCTTTAAAGTTCATGA 8059917 Query 13686 GTCGTATTTTACCATAGATTGGTCGCTCCATCCAGGCACGATCGTGAGTTCCGCATATTG 13745 |||||||||||| | | ||| || || ||| || ||||| ||| ||| || || | Sbjct 8059918 AGCGTATTTTACCAAACACTGGGCGTTCTCCCCAAGCTCGATCATGAACTCCACAGATAG 8059977 Query 13746 ACCACATGCAACC 13758 ||||||||||||| Sbjct 8059978 ACCACATGCAACC 8059990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396198551512281