Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq4472 102 7e-17 seq13703 84.2 2e-11 >seq4472 Length=7509737 Score = 102 bits (112), Expect = 7e-17 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 28548 GTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAA 28607 || |||||||| || ||||| || |||||||| || ||||| || || || || Sbjct 668723 GTCAAAATGCAGATTTTTGTTAAGACATTAACTGGCAAAACTATCACACTAGAGGTTGAG 668664 Query 28608 CCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTA 28667 ||| || ||| | | || | || ||| ||| |||||||| ||| | || Sbjct 668663 CCTAGTGACACGATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGAATTCCACCT 668604 Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 ||||| ||||| | ||||| || || || |||||||||||| | || || | || Sbjct 668603 GATCAGCAGAGGTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGTACCCTGTCTGAC 668544 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || ||||| ||||||||||| || ||| |||| ||||||| ||||||| || Sbjct 668543 TACAATATTCAGAAAGAATCTACACTTCACTTGGTTCTAAGATTGAGAGGAGGTAT 668488 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| ||||| || |||||||| || ||| || ||| Sbjct 667805 ATGCAAATTTTTGTCAAAACTTTAACTGGAAAAACCATCACATTAGAAGTTGAGCCTAGT 667746 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||||||| || |||||||| | || || ||| Sbjct 667745 GACACCATAGAAAATGTAAAGGCAAAAATCCAAGATAAAGAGGGTATTCCACCTGACCAA 667686 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTATA 28731 ||| | | || ||||| |||||||| | |||||| | | | ||| | ||||||| Sbjct 667685 CAGCGTTTAATTTTTGCCGGCAAACAGCTTGAAGATGGGCGTACATTAT--CAGATTATA 667628 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| ||||||||||||||| |||| | ||||| || | ||||||| || Sbjct 667627 ACATCCAAAAAGAATCTACTTTGCATCTTGTATTGAGGCTGAGAGGAGGAAT 667576 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || |||||| | || |||||||| || || ||| || ||| Sbjct 668033 ATGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGT 667974 Query 28614 GAGACGGTGGCCGATC--TCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || | | |||| |||| || ||||| || ||| | || |||| Sbjct 667973 GATACTATTGA-GAACGTTAAAGCCAAAA-TCCAAGACAAGGAAGGAATTCCTCCTGATC 667916 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 | || || ||||||||||| || ||||| | |||||| | ||| | | || |||| Sbjct 667915 AGCAAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATA 667856 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||||||||||| ||||| ||| |||| || || ||| |||| || || Sbjct 667855 ACATTCAAAAAGAATCCACTCTCCACTTGGTGTTGAGGTTAAGAGGTGGTAT 667804 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| ||||| || || ||||| || ||| || ||| Sbjct 667578 AATGCAAATTTTTGTGAAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGAGCCTAG 667519 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || | || ||||||| || || || || || | || ||||| Sbjct 667518 TGATACAATTGAAAATGTGAAAGCAAAAATTCAA-GATAAGGAAGGCATCCCTCCAGATC 667460 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 |||| || | || || || || || || || |||||| | ||| || ||||||| | Sbjct 667459 AACAAAGGTTGATTTTCGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACA 667400 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | || ||||||||||| || || || |||| ||||||| || || || || Sbjct 667399 ATATCCAAAAAGAATCCACCCTCCATTTGGTTCTAAGATTGCGTGGTGGTAT 667348 >seq13703 Length=2289824 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 |||||||| ||| | || ||||| |||||||| ||||||||| |||| | | ||| Sbjct 2085273 GATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACGAACTCTATCAGAT 2085214 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCA 28756 |||||||||||||| ||||||||||| || Sbjct 2085213 TATAACATTCAAAAGGAATCTACTCTTCA 2085185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425319082661007