Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq16166 118 5e-22 seq14474 118 5e-22 >seq16166 Length=1540 Score = 118 bits (130), Expect = 5e-22 Identities = 113/142 (80%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| ||| |||||||||||| || ||||||| ||||||||| |||||||| || | Sbjct 108 TCAACCCTCTGCATAAATAAATCAGGTATCCACAATGCATAAAACAAATCTCTTGCACGT 167 Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 ||| ||||| || ||| |||||||| | ||| | ||| ||||||||||| | ||||| Sbjct 168 TGTTCCTCTTTGCCAGTG-TTCTTTTTCAAATCAAGGAAGTCAAAAATATCAGCATGCCA 226 Query 26041 TGGTTCTAAATAGATAGCAAAA 26062 || ||||| || ||||||||| Sbjct 227 AGGCTCTAAGTAAATAGCAAAA 248 >seq14474 Length=2471489 Score = 118 bits (130), Expect = 5e-22 Identities = 113/142 (80%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| ||| |||||||||||| || ||||||| ||||||||| |||||||| || | Sbjct 1696440 TCAACCCTCTGCATAAATAAATCAGGTATCCACAATGCATAAAACAAATCTCTTGCACGT 1696499 Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 ||| ||||| || ||| |||||||| | ||| | ||| ||||||||||| | ||||| Sbjct 1696500 TGTTCCTCTTTGCCAGTG-TTCTTTTTCAAATCAAGGAAGTCAAAAATATCAGCATGCCA 1696558 Query 26041 TGGTTCTAAATAGATAGCAAAA 26062 || ||||| || ||||||||| Sbjct 1696559 AGGCTCTAAGTAAATAGCAAAA 1696580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252989013467975