Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq4472 141 1e-28 seq8883 138 2e-27 seq435 132 7e-26 seq10731 111 2e-19 seq6968 87.8 3e-12 seq13703 84.2 3e-11 >seq4472 Length=7509737 Score = 141 bits (156), Expect = 1e-28 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | ||||| |||| ||||||||||||||| ||||||| ||| | Sbjct 667349 ATGCAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGT 667290 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||| |||||| |||||| |||||||| ||||| || || || || ||| Sbjct 667289 GATACCATAGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCCGATCAA 667230 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||||| ||| ||||||||||| |||||| | |||| | |||||||| | Sbjct 667229 CAGCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACA-- 667172 Query 156003 ATATCCAAAGAG 156014 | ||||||| || Sbjct 667171 ACATCCAAAAAG 667160 Score = 132 bits (146), Expect = 7e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | |||||||||||||| ||||| || || || ||||| ||| | | Sbjct 667121 ATGCAGATATTTGTGAAAACATTGACTGGCAAAACAATAACTTTGGAAGTAGAACCTAGT 667062 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| |||||| ||| ||||| |||||||||||||| || ||||| || ||| Sbjct 667061 GATACTATTGAAAACGTAAAAGCCAAAATTCAAGATAAAGAAGGAATTCCTCCCGATCAA 667002 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | |||| || || || ||||| || ||| |||| | ||||| || || Sbjct 667001 CAGAGACTTATTTTCGCTGGAAAACAGCTAGAGGATGGTCGAACACTCTCAGACTACAAC 666942 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040 || || ||| | || |||||| | || || || || Sbjct 666941 ATTCAGAAGGAGTCCACACTTCATCTTGTTTTGAGGTT 666904 Score = 132 bits (146), Expect = 7e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | |||||| | ||||| |||||||| ||||||||||| || | | Sbjct 668033 ATGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGT 667974 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| ||| ||||| ||||| || ||||| || ||||| || || Sbjct 667973 GATACTATTGAGAACGTTAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAG 667914 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | || | ||| ||||| ||||| |||||| | ||| | ||||| ||||| Sbjct 667913 CAAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAAC 667854 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || || ||||| || |||||||| ||| Sbjct 667853 ATTCAAAAAGAATCCACTCTCCACTTGGTGTTGAGGTTAAGAGGTGGT 667806 Score = 118 bits (130), Expect = 2e-21 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| || ||||||||||| || ||||||||||| || | | Sbjct 667805 ATGCAAATTTTTGTCAAAACTTTAACTGGAAAAACCATCACATTAGAAGTTGAGCCTAGT 667746 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| || || ||||| ||||||||||| || || || || || ||| Sbjct 667745 GACACCATAGAAAATGTAAAGGCAAAAATCCAAGATAAAGAGGGTATTCCACCTGACCAA 667686 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | || |||| |||||| || ||||| |||||| | || ||||||||||||| Sbjct 667685 CAGCGTTTAATTTTTGCCGGCAAACAGCTTGAAGATGGGCGTACATTATCAGATTATA-- 667628 Query 156003 ATATCCAAAGAG 156014 | ||||||| || Sbjct 667627 ACATCCAAAAAG 667616 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| |||||||| || || || || || ||||| ||| | Sbjct 668489 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGT 668430 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||| || || |||||| ||||| |||||||| || || || || || Sbjct 668429 GACACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAG 668370 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | || |||| ||| || ||||||||||||||| | | || | ||||||||||| Sbjct 668369 CAACGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTTCAGATTATAAC 668310 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| ||||| | || | ||||| || | ||| |||| || ||| Sbjct 668309 ATACAGAAAGAATCAACTTTGCATTTGGTACTCAGACTAAGGGGAGGT 668262 Score = 114 bits (126), Expect = 2e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | ||||| | || || ||||||||||| ||||| || ||| | Sbjct 666893 ATGCAGATCTTCGTAAAAACTCTAACAGGGAAAACTATTACTTTAGAGGTTGAACCAAGT 666834 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||| || ||| || || |||||||||||||| || ||||| || ||| Sbjct 666833 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGATAAAGAAGGTATTCCTCCCGACCAA 666774 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | |||| | |||||| |||||| | |||||| | | || ||||| || |||| Sbjct 666773 CAACGTCTGATCTTTGCCGGGAAGCAGTTAGAAGATGGCCGCACCTTATCTGACTATA-- 666716 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 | ||||||| ||| | || | ||| | ||||| || | ||||| || Sbjct 666715 ACATCCAAAAGGAGTCAACATTACATCTTGTGTTGAGGCTCAGAGGAGG 666667 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || |||| || | || ||||||||||| || ||||| || || | Sbjct 666665 ATGCAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAGT 666606 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || |||||| ||| |||||| |||||||||||||| || || ||||| || Sbjct 666605 GACACAATAGAAAACGTCAAAGCTAAAATTCAAGATAAAGAAGGAATCCCCCCAGATCAG 666546 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | |||| |||||| || || || |||||| |||| || ||||| || || Sbjct 666545 CAAAGGCTTATTTTTGCCGGAAAACAACTAGAAGATGGTCGAACATTGTCAGACTACAAC 666486 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 ||| ||||| | || |||||| Sbjct 666485 ATACAGAAAGAATCCACACTTCAT 666462 >seq8883 Length=3689619 Score = 138 bits (152), Expect = 2e-27 Identities = 302/445 (68%), Gaps = 42/445 (9%) Strand=Plus/Plus Query 76259 TCTCTAATCGACATATGTTATGAACATATTAAAGATTCTTATTATTATGGTCTTTTTGGT 76318 ||| ||| || || | |||||| || ||||||||| |||||||||||| | | ||| Sbjct 2144175 TCTTTAAAAGATATTTATTATGAGCAAATTAAAGATAGTTATTATTATGGATTGTCTGGA 2144234 Query 76319 GATTTTAAACTTATAATAGATaaaaaaaCAGGTTATTTTAATGCAACGAAACTTTGTAAT 76378 ||||||||| | |||||||||||||| || || ||| | ||||| | || || ||||| Sbjct 2144235 GATTTTAAATTAATAATAGATAAAAATACTGGATATGTCAATGCTTCTAAGCTATGTAAA 2144294 Query 76379 TTAGCTGGTAAAAGATTTACTGACTGG-AAAAAATTAGATAGATCAAAAAATTTAATTTT 76437 | | ||||||||||||| | ||| | ||| || | | ||| | | | |||||||| Sbjct 2144295 TCAAGAGGTAAAAGATTTAAAAAGTGGTTAGAAAATAAAGA-ATCTATAGAGTTAATTTT 2144353 Query 76438 GTATGT--CAAAACCCAATGGGAGAATTCTACCATCGG-------------------ATT 76476 ||| | | || ||| ||||||||| |||| ||| Sbjct 2144354 ATATTTAGCTAA----AATCCTAGAATTCTAAATTCGGCCCCTCTAGAAAATTCATTATT 2144409 Query 76477 TTATGAGATAAAGGGTGATAATAATGATAATATAAGCAAGAAAATAACAGGTCAATATGT 76536 |||||| || || || || |||| || || || || |||| || | ||||| Sbjct 2144410 TTATGAAATTAAAGG---TAGAAATG-CAACTGAATTAA-AATATAATGGGAC-TTATGT 2144463 Query 76537 ATCTAAAGAAATTATTTTAGATATTTCATCTTGGATTTCAATTGAATTTTATATGAAATG 76596 ||||| || | ||| | |||| | | |||||||||| |||||||| || ||| Sbjct 2144464 TTCTAAGGATTTAATTACAAATATGGCTTGTTGGATTTCACCTGAATTTTCTAAAAAAGT 2144523 Query 76597 TAACGATATAATAATTAATTATTATAAAAACGAATTTaa--aaaaaTGAGTGAATATGAT 76654 |||||| | |||||||||||||| || |||||||| |||||| || || ||||| Sbjct 2144524 AAACGATGTTGTAATTAATTATTATGCTAATGAATTTAATGAAAAAT--GTAAAAATGAT 2144581 Query 76655 ATTGACTATAAAATT--AAAGAAAT 76677 ||| ||||| || |||||||| Sbjct 2144582 ATT---AATAAACTTCAAAAGAAAT 2144603 Score = 131 bits (144), Expect = 2e-25 Identities = 307/454 (68%), Gaps = 42/454 (9%) Strand=Plus/Minus Query 1992 ATTTCTTT--AAGTTTATAATCGATATCATATTCACTCAttttt--ttaaattcattatt 2047 |||||||| |||||||| | ||||||| || || |||||| |||||||||||| Sbjct 2144603 ATTTCTTTTGAAGTTTATTA---ATATCATTTTTAC--ATTTTTCATTAAATTCATTAGC 2144549 Query 2048 gtaataatttattattacatcattacattttaaataaaattCTGGCGATAACCAGGATGA 2107 |||||||| |||| ||||| || |||| | ||||||| || || | ||| | | Sbjct 2144548 ATAATAATTAATTACAACATCGTTTACTTTTTTAGAAAATTCAGGTGAAATCCAACAAGC 2144489 Query 2108 AATATCTAAAATAATTTCTTTAGGAACATATTGTCCAGTTAtttttttAGTAATTTCTTC 2167 |||| | ||| | || |||| |||||| |||| |||| |||| | | | || | Sbjct 2144488 CATATTTGTAATTAAATCCTTAGAAACATAA-GTCCCATTATATTTTAATTCAGTTG--C 2144432 Query 2168 ATTATTATCACCTTTAATCTCATAAAACCCGGTAT-------------CGACATCTCGAT 2214 ||| || |||||||| |||||||| | || ||| || | || Sbjct 2144431 ATTTCTA---CCTTTAATTTCATAAAATAATGAATTTTCTAGAGGGGCCGA-ATTTAGAA 2144376 Query 2215 ATCGGTTATTTATAACATAATTTA---TTAAATTTTTAGATT---TATCTAATGATTTCC 2268 || |||| || | ||| || |||| | | |||||| ||| | | | || Sbjct 2144375 TTCTAGGATTT-TAGCTAAATATAAAATTAACTCTATAGATTCTTTATTTTCTAA---CC 2144320 Query 2269 AATGTATATATCTTTTACCACCTAAATTACATAATTTTGTCGCATTAAAACAACCTGttt 2328 | | | || |||||||||| | | | ||||||| || | ||||| | | | || || | Sbjct 2144319 ACTTTTTAAATCTTTTACCTCTTGATTTACATAGCTTAGAAGCATTGACATATCCAGTAT 2144260 Query 2329 ttttATCTATTATAAGTTTAAAATCACCAAAAAGACCATAATAATAAGAATCTTTAATAT 2388 ||||||||||||| | ||||||||| ||| | | |||||||||||| ||||||||| | Sbjct 2144259 TTTTATCTATTATTAATTTAAAATCTCCAGACAATCCATAATAATAACTATCTTTAATTT 2144200 Query 2389 GTTCATAACATATGTCGATTAGAGA---CATTTT 2419 | |||||| | || || ||| ||| |||||| Sbjct 2144199 GCTCATAATAAATATCTTTTAAAGAAGTCATTTT 2144166 Score = 131 bits (144), Expect = 2e-25 Identities = 301/445 (68%), Gaps = 39/445 (9%) Strand=Plus/Plus Query 226338 TCTCTAATCGACATATGTTATGAACATATTAAAGATTCTTATTATTATGGTCTTTTTGGT 226397 ||| ||| || || | |||||| || ||||||||| |||||||||||| | | ||| Sbjct 2144175 TCTTTAAAAGATATTTATTATGAGCAAATTAAAGATAGTTATTATTATGGATTGTCTGGA 2144234 Query 226398 GATTTTAAACTTATAATAGATaaaaaaaCAGGTTGTTTTAATGCGACAAAATTATGTAAT 226457 ||||||||| | |||||||||||||| || || | | | ||||| | || ||||||| Sbjct 2144235 GATTTTAAATTAATAATAGATAAAAATACTGGATATGTCAATGCTTCTAAGCTATGTAAA 2144294 Query 226458 TTAGGTGGTAAAAGATATATACATTGGAAATCATTAGATA---AATCTAAAAATTTAA-- 226512 | | | |||||||||| || | | ||| | | | ||| |||||| | | |||| Sbjct 2144295 TCAAGAGGTAAAAGATTTAAAAAGTGG---TTAGAAAATAAAGAATCTATAGAGTTAATT 2144351 Query 226513 -TAAATTATGTTATAAATAACCGATATCGAGATGTCG-------------ATACCGGGTT 226558 || ||| | || |||| || || | || ||| || | || Sbjct 2144352 TTATATTTAGCTA-AAATCCTAGAATTCTAAAT-TCGGCCCCTCTAGAAAATTCATTATT 2144409 Query 226559 TTATGAGATTAAAGGTGATAATAATGAAGAAATTACTaaaaaaaTAACTGGACAATATGT 226618 |||||| |||||||| || |||| || | | | |||| |||| |||| ||||| Sbjct 2144410 TTATGAAATTAAAGG---TAGAAATG--CAACTGAATTAAAATATAATGGGAC-TTATGT 2144463 Query 226619 TCCTAAAGAAATTATTTTAGATATTTCATCCTGGTTATCGCCAGaattttatttaaaatg 226678 | |||| || | ||| | |||| | | ||| | || || ||||||| | |||| Sbjct 2144464 TTCTAAGGATTTAATTACAAATATGGCTTGTTGGATTTCACCTGAATTTTCTAAAAAAGT 2144523 Query 226679 taatgatgtaataataaattattacaataatgaatttaa--aaaaaTGAGTGAATATGAT 226736 || ||||| |||| |||||||| |||||||||||| |||||| || || ||||| Sbjct 2144524 AAACGATGTTGTAATTAATTATTATGCTAATGAATTTAATGAAAAAT--GTAAAAATGAT 2144581 Query 226737 ATCGATTATAAACTT--AAAGAAAT 226759 || | |||||||| |||||||| Sbjct 2144582 AT---TAATAAACTTCAAAAGAAAT 2144603 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 123066 TCTCTAAATGATATTTGCTACGAACAGATAAAAGATTCATTTCATTATGGTCTTTTTGGT 123125 ||| |||| ||||||| || || || || |||||| | | ||||||| | | ||| Sbjct 2144175 TCTTTAAAAGATATTTATTATGAGCAAATTAAAGATAGTTATTATTATGGATTGTCTGGA 2144234 Query 123126 GGTTTTAAACTAGTAATCGATAAAACTAATGGTTATTTTAATGCAACTAAATTATGTAAA 123185 | ||||||| || |||| ||||||| || ||| ||| | ||||| |||| |||||||| Sbjct 2144235 GATTTTAAATTAATAATAGATAAAAATACTGGATATGTCAATGCTTCTAAGCTATGTAAA 2144294 Query 123186 GACGGTGGTAAAAGATTCAAACATTGGAATGAAAATGATAAATCTAAAGAAATAATTATA 123245 | ||||||||||| ||| | ||| |||||| | |||||| ||| ||||| || Sbjct 2144295 TCAAGAGGTAAAAGATTTAAAAAGTGGTTAGAAAATAAAGAATCTATAGAGTTAATTTTA 2144354 Query 123246 TATGTA 123251 ||| || Sbjct 2144355 TATTTA 2144360 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/132 (77%), Gaps = 3/132 (2%) Strand=Plus/Minus Query 111015 TTTACACAACTTCGTAGCGTTAAAGTAACCTGTATTTTTATCTATTATTAGTCTAAAATC 111074 |||||| | ||| | ||| || | || || ||||||||||||||||||| | ||||||| Sbjct 2144294 TTTACATAGCTTAGAAGCATTGACATATCCAGTATTTTTATCTATTATTAATTTAAAATC 2144235 Query 111075 TCCAAATAGACCATAATGAAATGAATCTTTTATCTGTTCATAACATATATCATTTAGAGA 111134 |||| | | ||||||| | | |||||| || || |||||| | ||||| |||| ||| Sbjct 2144234 TCCAGACAATCCATAATAATAACTATCTTTAATTTGCTCATAATAAATATCTTTTAAAGA 2144175 Query 111135 ---CATTTTATT 111143 ||||||||| Sbjct 2144174 AGTCATTTTATT 2144163 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 223408 GATATTTGCTATGAAAAAATCAAAGACTCATTTCATTATGGTCTTTTTGGTGATTTTAAA 223467 ||||||| ||||| |||| ||||| | | ||||||| | | ||| ||||||||| Sbjct 2144184 GATATTTATTATGAGCAAATTAAAGATAGTTATTATTATGGATTGTCTGGAGATTTTAAA 2144243 Query 223468 CTAATAATTGATAAAAATACAGGTTATTTTAACGCAACCAAGCTGTGCAAAGATGGAGGA 223527 ||||||| ||||||||||| || ||| | || || | ||||| || ||| |||| Sbjct 2144244 TTAATAATAGATAAAAATACTGGATATGTCAATGCTTCTAAGCTATGTAAATCAAGAGGT 2144303 Query 223528 AAGGAATATAAACATTGGTACGAAAATATAAAATCTAAAGAATTA 223572 || || |||| | |||| ||||||| | |||||| ||| ||| Sbjct 2144304 AAAAGATTTAAAAAGTGGTTAGAAAATAAAGAATCTATAGAGTTA 2144348 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 5179 TAATTCTTTAGATTTTATATTTTCGTACCAATGTTTATATTCCTTTCCTCCATCTTTGCA 5238 ||| ||| |||||| | ||||||| |||| | |||| || || |||| ||| || Sbjct 2144348 TAACTCTATAGATTCTTTATTTTCTAACCACTTTTTAAATCTTTTACCTCTTGATTTACA 2144289 Query 5239 CAGCTTGGTTGCGTTAAAATAACCTGTATTTTTATCAATTATTAGTTTAAAATCACCAAA 5298 ||||| | || || | ||| || ||||||||||| ||||||| ||||||||| ||| | Sbjct 2144288 TAGCTTAGAAGCATTGACATATCCAGTATTTTTATCTATTATTAATTTAAAATCTCCAGA 2144229 Query 5299 AAGACCATAATGAAATGAGTCTTTGATTTTTTCATAGCAAATATC 5343 | ||||||| | | ||||| |||| ||||| ||||||| Sbjct 2144228 CAATCCATAATAATAACTATCTTTAATTTGCTCATAATAAATATC 2144184 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 225048 TACGAGCAGATTAAAGACCAATATTATTATGGTCTTTTTGGTGAATTTAGATTAATTATA 225107 || ||||| |||||||| ||||||||||| | | ||| || |||| |||||| ||| Sbjct 2144193 TATGAGCAAATTAAAGATAGTTATTATTATGGATTGTCTGGAGATTTTAAATTAATAATA 2144252 Query 225108 GATAAAAATACAGGTTATTTTAATGCAACCAAGCTGTGTAAAGACGCCGGTGTTAAACTT 225167 ||||||||||| || ||| | ||||| | ||||| |||||| ||| | | || Sbjct 2144253 GATAAAAATACTGGATATGTCAATGCTTCTAAGCTATGTAAATCAAGAGGTAAAAGATTT 2144312 Query 225168 ACCAGATGGTTAGAATCTGAAAAATCCAAAGAATTAATTAAATATT 225213 | | ||||||||| | || |||| | ||| |||||| ||||| Sbjct 2144313 AAAAAGTGGTTAGAAAATAAAGAATCTATAGAGTTAATTTTATATT 2144358 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 3538 AATATTTAATTAATTCTTTGGATTTTTCAGATTCTAACCATCTGGTAAGTTTAACACCGG 3597 ||||| |||||| ||| | |||| || | ||||||||| | ||| | | ||| Sbjct 2144358 AATATAAAATTAACTCTATAGATTCTTTATTTTCTAACCACTTTTTAAATCTTTTACCTC 2144299 Query 3598 CGTCTTTACACAGCTTGGTTGCATTAAAATAACCTGTATTTTTATCTATAATTAATCTAA 3657 |||||| ||||| | ||||| | ||| || |||||||||||||| |||||| ||| Sbjct 2144298 TTGATTTACATAGCTTAGAAGCATTGACATATCCAGTATTTTTATCTATTATTAATTTAA 2144239 Query 3658 ATTCACCAAAAAGACCATAATAATATTGGTCTTTAATCTGCTCGTA 3703 | || ||| | | ||||||||||| |||||||| ||||| || Sbjct 2144238 AATCTCCAGACAATCCATAATAATAACTATCTTTAATTTGCTCATA 2144193 >seq435 Length=3082058 Score = 132 bits (146), Expect = 7e-26 Identities = 174/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| || ||| | ||||| ||||||||||||| || || | ||||| || Sbjct 740828 AAAATGCATATTTTTGTAAAAACCCTGACTGGAAAAACAATAACTCTTGAAGTAGAGTCG 740769 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | || | |||||| | ||||| |||||| ||||||| || |||||||| Sbjct 740768 TCTGACACCATCAATATTGTGAAACAAAAAATTCAAGATGAAGAAGGAATTCCTCCAGAT 740709 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||| |||| | ||| ||||||||| | || || | | ||| ||||||||||| Sbjct 740708 CAACAAAGGCTGATATTTGCGGGTAAGCAGTTGGATGACAAACGCACTCTATCAGATTAT 740649 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAAT 156057 | || ||||| | |||||||| | ||| || | || |||||| | ||||||| Sbjct 740648 GACATTCAAAAAGAATCAACGCTTCACATGGTGCTACGTTTGAGAGGCCGATAGTAAAAT 740589 >seq10731 Length=335687 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 75121 TTATAAAATGAATTCTTTAAATGACATTTGCTACGAACGCATTAATGATTCATATCATTA 75180 ||| | ||||| ||| |||||||| ||||| || |||| || | | | ||| || Sbjct 173711 TTAAATAATGAGTTCATTAAATGATATTTGTTATGAACAGATCGAAGGTAATTATTGGTA 173652 Query 75181 TGGTCTTTTTGGTGATTTTAAACTAGTAATCGATAAAACTACTGGTTATTTTAATGCAAC 75240 |||| | ||||| |||||||||||| | || |||||| ||||| ||||| ||||| || Sbjct 173651 TGGTTTATTTGGAGATTTTAAACTAATTATAGATAAAGAAACTGGATATTTCAATGCTAC 173592 Query 75241 TAAATTATGTAATTTCGGTGGTAAACAGTTTAAACAATGGAAACGTTTAGAAAAATCTCA 75300 ||| |||||||| | || |||||| | || ||| | ||| | | || ||| | | Sbjct 173591 TAAGTTATGTAAATCTGGAGGTAAAAATTTCAAAGATTGGCTAAGAAATAAAGAATATAA 173532 Query 75301 AGAATTAATTAAATAT 75316 || ||||||||| ||| Sbjct 173531 AGCATTAATTAATTAT 173516 Score = 111 bits (122), Expect = 2e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 123070 TAAATGATATTTGCTACGAACAGATAAAAGATTCATTTCATTATGGTCTTTTTGGTGGTT 123129 ||||||||||||| || |||||||| ||| | | | |||||| | ||||| | || Sbjct 173694 TAAATGATATTTGTTATGAACAGATCGAAGGTAATTATTGGTATGGTTTATTTGGAGATT 173635 Query 123130 TTAAACTAGTAATCGATAAAACTAATGGTTATTTTAATGCAACTAAATTATGTAAAGACG 123189 |||||||| | || |||||| | ||| ||||| ||||| ||||| ||||||||| | Sbjct 173634 TTAAACTAATTATAGATAAAGAAACTGGATATTTCAATGCTACTAAGTTATGTAAATCTG 173575 Query 123190 GTGGTAAAAGATTCAAACATTGGAATGAAAATGATAAATCTAAAGAAATAATTA 123243 | ||||||| |||||| ||||| |||| | ||| ||||| | |||||| Sbjct 173574 GAGGTAAAAATTTCAAAGATTGGCTAAGAAATAAAGAATATAAAGCATTAATTA 173521 Score = 105 bits (116), Expect = 1e-17 Identities = 287/430 (67%), Gaps = 32/430 (7%) Strand=Plus/Minus Query 76268 GACATATGTTATGAACATATTAAAGATTCTTATTATTATGGTCTTTTTGGTGATTTTAAA 76327 || || ||||||||||| || ||| | ||||| |||||| | ||||| ||||||||| Sbjct 173689 GATATTTGTTATGAACAGATCGAAGGTAATTATTGGTATGGTTTATTTGGAGATTTTAAA 173630 Query 76328 CTTATAATAGATaaaaaaaCAGGTTATTTTAATGCAACGAAACTTTGTAATTTAGCTGGT 76387 || || ||||||||| |||| || ||||| ||||| || || | ||||| | | ||| Sbjct 173629 CTAATTATAGATAAAGAAACTGGATATTTCAATGCTACTAAGTTATGTAAATCTGGAGGT 173570 Query 76388 AAAAGATTTACTGACTGG--AAAAAATTAGATAGATCAA--AAAATTTAATTTTGTATGT 76443 |||| || | || ||| || |||| | | || || | | |||||| | | | Sbjct 173569 AAAAATTTCAAAGATTGGCTAAGAAATAAAGAATATAAAGCATTAATTAATTATTATTCT 173510 Query 76444 C-AAAACCCAATGG-GAGAATTCTACCATCGGATTTT----------ATGAGATAAAGGG 76491 | |||| ||| ||||||||| | | ||||| | || |||| || Sbjct 173509 CGAAAAGTGGTTGGCGAGAATTCTCTCCAAGCATTTTTTCTATTTAAAACAGTTAAA-GG 173451 Query 76492 TGATAATAATGATAATATAAGCAAGAAAATAACAGGTCAATATGTATCTAAAGAAATTAT 76551 ||| ||| |||||| || || ||| ||||| |||||||| || ||| |||| Sbjct 173450 TGAAAAT-----CAATATACTGAA-AATATATCAGGTACATATGTATGTAGAGATTTTAT 173397 Query 76552 TTTAGATATTTCATCTTGGATTTCAATTGAATTTTATATGAAATGTAACGATATAATAAT 76611 | ||| | | |||||||||| |||||||| | | ||| |||| ||| || Sbjct 173396 TACTTCAATTGCTTGTTGGATTTCACTTGAATTTACTTTTAAAGTTAACAGTATTGTATC 173337 Query 76612 TAATTATTATAAAAACGAATTTaa--aaaaaTGAGTGAATATGATATTGACTATAAAAT- 76668 | |||||||| || |||| || |||||| | || |||||| || ||||||| Sbjct 173336 TGATTATTATGTTAATAAATTCAATGAAAAAT--ATAAAAATGATA---ACGATAAAATG 173282 Query 76669 -TAAAGAAAT 76677 |||||||| Sbjct 173281 AAAAAGAAAT 173272 Score = 105 bits (116), Expect = 1e-17 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 111015 TTTACACAACTTCGTAGCGTTAAAGTAACCTGTATTTTTATCTATTATTAGTCTAAAATC 111074 |||||| ||||| ||||| || || || || || | ||||||||| |||||| ||||||| Sbjct 173579 TTTACATAACTTAGTAGCATTGAAATATCCAGTTTCTTTATCTATAATTAGTTTAAAATC 173638 Query 111075 TCCAAATAGACCATAATGAAATGAATCTTTTATCTGTTCATAACATATATCATTTA 111130 |||||||| |||||| | | | ||| |||||||||||||| |||||||||| Sbjct 173639 TCCAAATAAACCATACCAATAATTACCTTCGATCTGTTCATAACAAATATCATTTA 173694 Score = 102 bits (112), Expect = 1e-16 Identities = 146/200 (73%), Gaps = 7/200 (4%) Strand=Plus/Plus Query 5167 ATAATATTCTACTAATTCTTTAGATTTTATATTTTCGTA-CCAATGTTTATATTCCTTTC 5225 |||||| | | |||| ||||| ||| | ||||| | || ||||| ||| | | || | Sbjct 173513 ATAATAATTAATTAATGCTTTATATTCTTTATTT-CTTAGCCAATCTTTGAAATTTTTAC 173571 Query 5226 CTCCATCTTTGCACAGCTTGGTTGCGTTAAAATAACCTGTATTTTTATCAATTATTAGTT 5285 ||||| ||| || | ||| || || || ||||| || || | |||||| || ||||||| Sbjct 173572 CTCCAGATTTACATAACTTAGTAGCATTGAAATATCCAGTTTCTTTATCTATAATTAGTT 173631 Query 5286 TAAAATCACCAAAAAGACCATAATGA-AATGAGTCTTTGATTTTTTCATAGCAAATATCG 5344 ||||||| ||||| | |||||| | ||| | ||| ||| | |||||| |||||||| Sbjct 173632 TAAAATCTCCAAATAAACCATACCAATAATTA-CCTTCGATCTGTTCATAACAAATATCA 173690 Query 5345 ATTAGTGA---CATTTTTTA 5361 ||| ||| |||| |||| Sbjct 173691 TTTAATGAACTCATTATTTA 173710 Score = 102 bits (112), Expect = 1e-16 Identities = 146/200 (73%), Gaps = 7/200 (4%) Strand=Plus/Minus Query 223390 TAAAAAATG---TCACTAATCGATATTTGCTATGAAAAAATCAAAGACTCATT-TCATTA 223445 |||| |||| ||| ||| |||||||| |||||| | ||| ||| | ||| | || Sbjct 173710 TAAATAATGAGTTCATTAAATGATATTTGTTATGAACAGATCGAAGG-TAATTATTGGTA 173652 Query 223446 TGGTCTTTTTGGTGATTTTAAACTAATAATTGATAAAAATACAGGTTATTTTAACGCAAC 223505 |||| | ||||| |||||||||||||| || |||||| | || || ||||| || || || Sbjct 173651 TGGTTTATTTGGAGATTTTAAACTAATTATAGATAAAGAAACTGGATATTTCAATGCTAC 173592 Query 223506 CAAGCTGTGCAAAGATGGAGGAAAGGAATATAAACATTGG-TACGAAAATATAAAATCTA 223564 ||| | || ||| |||||| || | | ||| ||||| || | ||||| | ||| || Sbjct 173591 TAAGTTATGTAAATCTGGAGGTAAAAATTTCAAAGATTGGCTAAG-AAATAAAGAATATA 173533 Query 223565 AAGAATTAGTAGAATATTAT 223584 ||| |||| | | |||||| Sbjct 173532 AAGCATTAATTAATTATTAT 173513 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 2281 TTTTACCACCTAAATTACATAATTTTGTCGCATTAAAACAACCTGtttttttATCTATTA 2340 ||||||| || | |||||||| || || ||||| ||| | || |||| ||||||||| | Sbjct 173566 TTTTACCTCCAGATTTACATAACTTAGTAGCATTGAAATATCCAGTTTCTTTATCTATAA 173625 Query 2341 TAAGTTTAAAATCACCAAAAAGACCATAATAATAAGAATCTTTAATATGTTCATAACATA 2400 | ||||||||||| ||||| | |||||| ||||| | ||| || ||||||||||| | Sbjct 173626 TTAGTTTAAAATCTCCAAATAAACCATACCAATAATTACCTTCGATCTGTTCATAACAAA 173685 Query 2401 TGTC 2404 | || Sbjct 173686 TATC 173689 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 226347 GACATATGTTATGAACATATTAAAGATTCTTATTATTATGGTCTTTTTGGTGATTTTAAA 226406 || || ||||||||||| || ||| | ||||| |||||| | ||||| ||||||||| Sbjct 173689 GATATTTGTTATGAACAGATCGAAGGTAATTATTGGTATGGTTTATTTGGAGATTTTAAA 173630 Query 226407 CTTATAATAGATaaaaaaaCAGGTTGTTTTAATGCGACAAAATTATGTAATTTAGGTGGT 226466 || || ||||||||| |||| || | ||| ||||| || || |||||||| | || ||| Sbjct 173629 CTAATTATAGATAAAGAAACTGGATATTTCAATGCTACTAAGTTATGTAAATCTGGAGGT 173570 Query 226467 AAAA 226470 |||| Sbjct 173569 AAAA 173566 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 71192 TTAAATGACATTTGCTACGAACGCATTAATGATTCATATCATTATGGTCTTTTTGGTGAT 71251 |||||||| ||||| || |||| || | | | ||| |||||| | ||||| ||| Sbjct 173695 TTAAATGATATTTGTTATGAACAGATCGAAGGTAATTATTGGTATGGTTTATTTGGAGAT 173636 Query 71252 TTTAAACTAATCATAGATAAAACTACTGGTTATTTTAATGCAATTAAATTATGTAATATA 71311 ||||||||||| ||||||||| ||||| ||||| ||||| | ||| |||||||| Sbjct 173635 TTTAAACTAATTATAGATAAAGAAACTGGATATTTCAATGCTACTAAGTTATGTAAATCT 173576 Query 71312 GGTGGTAAAAAATACAGACATTGG 71335 || |||||||| | || | ||||| Sbjct 173575 GGAGGTAAAAATTTCAAAGATTGG 173552 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 123975 TAAATGATATATGTTATGAACAGATAAAAGATTCATTTCATTATGGTCTTTTTAATGATT 124034 |||||||||| |||||||||||||| ||| | | | |||||| | ||| |||| Sbjct 173694 TAAATGATATTTGTTATGAACAGATCGAAGGTAATTATTGGTATGGTTTATTTGGAGATT 173635 Query 124035 TTAAACTTATTATAAATAAAAGCACCGGATATTTTAACGCAAACAAGCTGTGTAAAGATG 124094 ||||||| |||||| ||||| || |||||||| || || | ||| | |||||| || Sbjct 173634 TTAAACTAATTATAGATAAAGAAACTGGATATTTCAATGCTACTAAGTTATGTAAATCTG 173575 Query 124095 GCAGTATAGAATTTTATA-ATTGGCCATCAAATA 124127 | ||| | ||||| | | |||||| | ||||| Sbjct 173574 GAGGTA-AAAATTTCAAAGATTGGCTAAGAAATA 173542 >seq6968 Length=4750 Score = 87.8 bits (96), Expect = 3e-12 Identities = 277/420 (66%), Gaps = 21/420 (5%) Strand=Plus/Plus Query 124975 AAAATTAAAAGA--AGAAAATTTAAATCTGCAAAGATTT--AATATGAATATGAAAAATT 125030 |||||||||||| || ||||| ||| | |||| | |||| ||||| ||||||| Sbjct 4160 AAAATTAAAAGATAAGGAAATTGAAAAATT-AAAGCTAGCAAATAATAATATTAAAAATT 4218 Query 125031 TTATAGACAATGTCAAAGATAAAAATAAAAATGGTTTCATATATATAGCTA-CATCAACA 125089 |||| |||||||| |||| |||| |||| | ||||||||| || || || ||||| Sbjct 4219 TTATCGACAATGTAAAAGTAAAAAGTAAA----GATTCATATATTTACATAGCAACAACA 4274 Query 125090 AGATACGCTTCCATAAAT---AATTTTAAAATAGGCAAAACAGATAATTTATTAACAAGA 125146 || ||| | ||| ||||||||| |||| | || | |||||| | ||||| Sbjct 4275 CTTCACTATTCAAAGAATAACAATTTTAAAGTAGGACATACTAAAAATTTAAAAGCAAGA 4334 Query 125147 TTATCAAATTTCAACTCATCGCGTAATGATCAAGATTTATTTTATATATGT-TATTACGA 125205 ||| | || || | | ||| | | || || | |||| || || |||| | | Sbjct 4335 TTAGCTGGTTATAATACGGGCAGAAATTCTAATGACTTGTATTAT-TACGTATATTTCAA 4393 Query 125206 TAAAGTGTATGACATGGCAAAA---ACAGAAAAATTAATTCATGATTTATTAAATGATTT 125262 ||||| ||||| |||||| || ||||| ||||| || | | ||||| Sbjct 4394 AAAAGTTTATGA---AGCAAAAGAGGTTGATAAATTGATTCAAAGAATACTCATAGATTT 4450 Query 125263 TAGAGATAAAAAGGGTAAAGAAATATTCATTTTACATTATATTCCGCTTATAGAAATAGt 125322 || ||||| || | |||||| | | |||| | ||||| | ||| | |||| | Sbjct 4451 TAAAGATAGTAAACGCAAAGAAGTTTACATTCTTAATTATTTATATCTTCAAAAAATTGC 4510 Query 125323 taaattagtaataaaaaatataaacgaaccttatgattatattaataatttaatcaaaaa 125382 |||||| || | || ||| || ||| || |||| || ||| ||||||| |||| Sbjct 4511 AAAATTAATAGTTAATAATTACAATGAATGTTTTGATGTGATGAATGATTTAATTGAAAA 4570 >seq13703 Length=2289824 Score = 84.2 bits (92), Expect = 3e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 155924 AGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAG 155983 ||| || || || || ||||||||||| |||| |||||| || ||| | |||||| | Sbjct 2085286 AGGTATTCCCCCTGATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACG 2085227 Query 155984 AACTTTATCAGATTATAATATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAA 156042 |||| ||||||||||||| || || |||| | | || ||||||||||| | | || | Sbjct 2085226 AACTCTATCAGATTATAACAT-TCAAAAGGAATCTACTCTTCATTTAGTTCTTCGTTTGA 2085168 Query 156043 GAGGCGGTGT 156052 | || ||||| Sbjct 2085167 GGGGTGGTGT 2085158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731720749502800