Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5138 159 4e-33 seq3375 105 8e-17 >seq5138 Length=1357 Score = 159 bits (176), Expect = 4e-33 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||| |||||| ||| | || ||||| || ||||||||||| |||| | ||| ||| Sbjct 1134 GCCAACTCGCCGGGCAGAAGAAGACGCACAGCCGTCTGGATCTCCCGCGAGGTGATGGTG 1075 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| |||||||||| || ||||||| | ||||||| |||| |||||| Sbjct 1074 GAGCGCTTGTTGTAGTGCGCCAGGCGAGAAGCCTCGGCGGCGATGCGCTCGAAAATGTCG 1015 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| |||||||| ||||| |||| |||||||||| ||| || || ||| Sbjct 1014 TTGACAAAGCTGTTCATGATGCTCATCGCCTTGCTGGAGATGCCGGTGTCAGGATGGACC 955 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||||||||||||| Sbjct 954 TGCTTCAGCACCTTGTAGATG 934 >seq3375 Length=12126510 Score = 105 bits (116), Expect = 8e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||||||||||| ||| || ||| || || |||||||| | ||| || | ||| | Sbjct 1832777 TGGCCAGTTCGCCGGGCAAGAGCAGCCGGACAGCGGTCTGTACCTCTCGGCTAGTGATAG 1832836 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | |||||||| |||| ||||| || | || | | | ||||| || | |||| Sbjct 1832837 TTGACCGCTTGTTGTAGTGGGCCAGGCGAGAAGATTCAGCGGCAATGCGTTCAAATATGT 1832896 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 | ||||| || |||||||| ||||| | |||| | |||||||| ||| || || | Sbjct 1832897 CATTGACGAAGCTGTTCATGATGGACATGGCCTTGCTCGAGATGCCAGTGTCCGGATGAA 1832956 Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || ||||| || ||| Sbjct 1832957 CCTGCTTCAGGACCTTATATATG 1832979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105782424595961