Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4472 161 9e-35 seq13703 95.1 1e-14 >seq4472 Length=7509737 Score = 161 bits (178), Expect = 9e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| ||||||| ||||| || || || ||||| || ||||| ||| | | Sbjct 668261 ATGCAGATTTTTGTTAAAACTCTAACTGGGAAGACAATTACTCTAGAAGTTGAACCAAGT 668202 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| |||||| || ||||||||||||||||| || || || ||||| Sbjct 668201 GATACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAG 668142 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| |||| ||||| || ||||| || || ||| | | | || || |||||| Sbjct 668141 CAACGTCTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCGGACTATAAC 668082 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||||| ||||||||| || | ||| | || || Sbjct 668081 ATTCAAAAAGAATCTACACTTCACTTGGTGCTGAGGTTGAGAGGTGG 668035 Score = 159 bits (176), Expect = 3e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| || ||||||||||| | || || ||| | | Sbjct 666893 ATGCAGATCTTCGTAAAAACTCTAACAGGGAAAACTATTACTTTAGAGGTTGAACCAAGT 666834 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||||||||| |||||||| || |||||||| ||| Sbjct 666833 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGATAAAGAAGGTATTCCTCCCGACCAA 666774 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| |||||||||||||||| ||| | || ||| | | | | || || |||||| Sbjct 666773 CAACGTCTGATCTTTGCCGGGAAGCAGTTAGAAGATGGCCGCACCTTATCTGACTATAAC 666714 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 || |||||||| || ||| |||| | |||||| Sbjct 666713 ATCCAAAAGGAGTCAACATTACATCTTGTGTTG 666681 Score = 149 bits (164), Expect = 6e-31 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || ||||||||||| || | |||||||| | | Sbjct 668033 ATGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGT 667974 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| |||| | ||| ||||||||||| |||||||| ||||| ||||| Sbjct 667973 GATACTATTGAGAACGTTAAAGCCAAA-ATCCAAGACAAGGAAGGAATTCCTCCTGATCA 667915 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | |||||||| || |||||||| || ||| | | | ||||| ||||| Sbjct 667914 GCAAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAA 667855 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 ||||||||| ||||| || || |||||||||||| Sbjct 667854 CATTCAAAAAGAATCCACTCTCCACTTGGTGTTG 667821 Score = 141 bits (156), Expect = 8e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||||||||| || ||||| ||| | | Sbjct 667349 ATGCAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGT 667290 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||||| || ||| || || ||||| || ||||| || || ||||||||| Sbjct 667289 GATACCATAGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCCGATCAA 667230 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| ||||| || || ||||| || ||| ||| | | |||||||| ||| Sbjct 667229 CAGCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAAC 667170 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 || ||||| ||||| ||||| || |||| ||| Sbjct 667169 ATCCAAAAAGAATCTACACTCCATCTGGTTTTG 667137 Score = 132 bits (146), Expect = 4e-26 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| | || || ||||| || || | ||||||||| | | Sbjct 667121 ATGCAGATATTTGTGAAAACATTGACTGGCAAAACAATAACTTTGGAAGTAGAACCTAGT 667062 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| |||||| || || ||||| ||||||||||| |||||||||||| Sbjct 667061 GATACTATTGAAAACGTAAAAGCCAAAATTCAAGATAAAGAAGGAATTCCTCCCGATCAA 667002 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | || || || || |||||||| |||||| |||| | || | ||||| || | Sbjct 667001 CAGAGACTTATTTTCGCTGGAAAACAGCTAGAGGATGGTCGA-ACAC-TCTCAGACTACA 666944 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||| ||||| || ||||| || | || ||| | ||||| || || Sbjct 666943 ACATTCAGAAGGAGTCCACACTTCATCTTGTTTTGAGGTTGCGTGGTGG 666895 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| |||| || |||| || |||||||| || || || || || | | Sbjct 668717 ATGCAGATTTTTGTTAAGACATTAACTGGCAAAACTATCACACTAGAGGTTGAGCCTAGT 668658 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||| |||||||||||||| || || ||||| Sbjct 668657 GACACGATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGAATTCCACCTGATCAG 668598 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| || || || || |||| ||| | | | |||| || || || Sbjct 668597 CAGAGGTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGTACCCTGTCTGACTACAAT 668538 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| ||||| |||||||| | ||||| | ||||| Sbjct 668537 ATTCAGAAAGAATCTACACTTCACTTGGTTCTAAGATTGAGAGGAGG 668491 Score = 127 bits (140), Expect = 2e-24 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || ||||| || |||||||| || | || ||||| ||| Sbjct 666665 ATGCAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAGT 666606 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||||| || ||| || || ||||| ||||||||||| || || ||||| Sbjct 666605 GACACAATAGAAAACGTCAAAGCTAAAATTCAAGATAAAGAAGGAATCCCCCCAGATCAG 666546 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880 ||| | | || |||||||| ||||| || || ||| ||| |||| ||||||| || Sbjct 666545 CAAAGGCTTATTTTTGCCGGAAAACAACTAGAAGATGGTCG---AACATTGTCAGACTAC 666489 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || ||||| ||||| || | || || | |||| ||||| Sbjct 666488 AACATACAGAAAGAATCCACACTTCATCTTGTCCTGAGGCTGCGTGGAGG 666439 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| |||| || ||||| || || | ||||| || | | Sbjct 667805 ATGCAAATTTTTGTCAAAACTTTAACTGGAAAAACCATCACATTAGAAGTTGAGCCTAGT 667746 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||||| ||||| ||| |||||||| ||||| || || || || || ||| Sbjct 667745 GACACCATAGAAAATGTAAAGGCAAAAATCCAAGATAAAGAGGGTATTCCACCTGACCAA 667686 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||| || |||||||| |||||||| || ||| | | | | |||||||||||| Sbjct 667685 CAGCGTTTAATTTTTGCCGGCAAACAGCTTGAAGATGGGCGTACATTATCAGATTATAAC 667626 Query 24884 ATTCAAAAGGAATCGAC 24900 || ||||| ||||| || Sbjct 667625 ATCCAAAAAGAATCTAC 667609 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| | || || || || || || | ||||| ||| ||| Sbjct 668489 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGT 668430 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| ||||| || ||||||||||||||||| || || || || || Sbjct 668429 GACACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAG 668370 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| || ||||| || || ||||| || ||| | | | |||||||||||| Sbjct 668369 CAACGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTTCAGATTATAAC 668310 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || ||||| || | || ||||| Sbjct 668309 ATACAGAAAGAATCAACTTTGCATTTGGT 668281 Score = 109 bits (120), Expect = 5e-19 Identities = 115/150 (77%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 24781 AAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGC 24840 ||| ||||| || ||||||||||| || || ||||||||||| || ||| | || ||||| Sbjct 666278 AAAGCAAAA-ATTCAAGACAAAGAGGGTATCCCTCCCGATCAGCAGCGTCTCATTTTTGC 666220 Query 24841 CGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGAC 24900 ||| || || || || ||| | ||| | | ||||| || ||||||||||||||||| || Sbjct 666219 CGGCAAGCAACTTGAAGATGGGCGAACCCTTTCAGACTACAACATTCAAAAGGAATCCAC 666160 Query 24901 ACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| | || || | ||||| Sbjct 666159 TCTTCATTTGGTACTCCGTCTGAGAGGAGG 666130 >seq13703 Length=2289824 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 ||| || || || ||||||||| | || || |||||||| |||||| |||| ||| | Sbjct 2085286 AGGTATTCCCCCTGATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACG 2085227 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 || | |||||||||||||||||||||||||| || || || || || | || ||| | Sbjct 2085226 AACTCTATCAGATTATAACATTCAAAAGGAATCTACTCTTCATTTAGTTCTTCGTTTGAG 2085167 Query 24925 CGGAGGCGGAACTGAGCCAA 24944 || || | | |||||||| Sbjct 2085166 GGGTGGTGTTATTGAGCCAA 2085147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449804623037240