Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4472 113 3e-20 seq435 87.8 1e-12 >seq4472 Length=7509737 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||||||||| |||| ||||| || || || ||||||||||||||||| Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || ||||| ||||| || || ||||| |||||||| || | || Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | ||||| ||| || | | || | ||| | | || || Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || ||||| || || || || || ||||| |||||||| Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||| || | ||||| || || || |||| || |||||| || ||||||||||| || Sbjct 666667 CCTCCTCTGAGCCTCAACACAAGATGTAATGTTGA-CTCCTTTTGGATGTTATAGTCAGA 666725 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || | |||| |||| || | ||||| ||||| |||||||| ||||| ||||| | || Sbjct 666726 TAAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGG 666785 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || || || || | || || ||| || | | || | ||| | | || || Sbjct 666786 AATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAAC 666845 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || || || || || || || ||||| ||||||||||| Sbjct 666846 CTCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 |||||||| | || || |||| || || | || | || ||||| |||||||| || || Sbjct 668263 CCTCCCCTTAGTCTGAGTACCAAATGCAAAGTTGAT-TCTTTCTGTATGTTATAATCTGA 668321 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || | || |||| || || ||||| || || || || | ||||||||||| | || Sbjct 668322 AAGTGTACGGCCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGG 668381 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || || ||||| | ||||| || || | | || | ||| ||| || || Sbjct 668382 AATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAAC 668441 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||||||||| || || | || || |||||||||||||| Sbjct 668442 TTCCAAGGTTATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | |||||||| || || |||| ||| ||||||||||||||| ||||| || Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 666954 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || || || ||||| ||||| || |||| || || || | || Sbjct 666955 AGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGA 667014 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || || || | ||||| ||| ||| | | || | ||| | | || || Sbjct 667015 ATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACT 667074 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| || || || || | || || ||||| |||||||| Sbjct 667075 TCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || || ||||||| |||| ||| | ||| || || |||||||||||||| || Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || || || || || ||||| || | |||||| || | || Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | ||||| ||| ||| | || | ||| | | ||| || Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACT 667986 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || || || || || || || || || || |||||||| Sbjct 667987 TCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 >seq435 Length=3082058 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 34754 CCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGG 34813 || ||||| | || |||| ||||| || || || ||||||| ||| || ||||| Sbjct 740602 CCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGA 740661 Query 34814 CTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACC 34873 |||| | || |||| ||||| || || || ||||| | ||| || ||| | || | Sbjct 740662 GTGCGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATT 740721 Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT-ATCGATTCATTGGCCTCGACATC 34932 || || | || | ||||||||||| || || | || | ||| | ||| || || Sbjct 740722 CCTTCTTCATCTTGAATTTTTTGTTTCAC-AATATTGATGGTGTCAGACGACTCTACTTC 740780 Query 34933 AACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || ||||| || ||||| |||||||| || ||||| Sbjct 740781 AAGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCAT 740825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325627174223927