Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq4472 159 5e-34 seq6968 143 4e-29 seq435 123 4e-23 seq13703 95.1 2e-14 >seq4472 Length=7509737 Score = 159 bits (176), Expect = 5e-34 Identities = 178/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| ||||| ||||| || || ||| | || ||||| | || | Sbjct 667576 TGCAAATTTTTGTGAAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGAGCCTAGTG 667517 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||||| ||| ||| |||||||| || || ||||||| Sbjct 667516 ATACAATTGAAAATGTGAAAGCAAAAATTCAAGATAAGGAAGGCATCCCTCCAGATCAAC 667457 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| | ||||| || ||||| || ||||| ||| ||||| || | ||||| |||| Sbjct 667456 AAAGGTTGATTTTCGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACAATA 667397 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||||||||| || ||||||| || || |||| | || |||| ||||||| Sbjct 667396 TCCAAAAAGAATCCACCCTCCATTTGGTTCTAAGATTGCGTGGTGGTATGCAAATATT 667339 Score = 141 bits (156), Expect = 1e-28 Identities = 149/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | |||||||| || || |||||||| ||| | || ||||||| || | Sbjct 667120 TGCAGATATTTGTGAAAACATTGACTGGCAAAACAATAACTTTGGAAGTAGAACCTAGTG 667061 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||| |||||| ||||| ||| ||||||||| ||||| |||||||||| Sbjct 667060 ATACTATTGAAAACGTAAAAGCCAAAATTCAAGATAAAGAAGGAATTCCTCCCGATCAAC 667001 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| ||||| || || ||||| |||| ||| | |||| | |||| || || | Sbjct 667000 AGAGACTTATTTTCGCTGGAAAACAGCTAGAGGATGGTCGAACACTCTCAGACTACAACA 666941 Query 146212 TACAAAAAGAATCGAC 146227 | || || || || || Sbjct 666940 TTCAGAAGGAGTCCAC 666925 Score = 138 bits (152), Expect = 2e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| | ||||||||||| ||||| | || || |||| | | Sbjct 667348 TGCAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGTG 667289 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| ||| |||||| ||| ||| ||||| |||||||||||||||| Sbjct 667288 ATACCATAGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCCGATCAAC 667229 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || |||||||| ||||| || | || ||| |||| | ||||||| || | Sbjct 667228 AGCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAACA 667169 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | ||||||||||| || ||||| | || || Sbjct 667168 TCCAAAAAGAATCTACACTCCATCTGGTTTT 667138 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | |||||| | || || ||||| || || | || ||||| | || | Sbjct 668032 TGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGTG 667973 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | || || ||| ||||| ||| || ||||| ||||| || ||||| | Sbjct 667972 ATACTATTGAGAACGTTAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAGC 667913 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || || |||||||||||||| | || ||| | | || | |||| ||||| | Sbjct 667912 AAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAACA 667853 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| ||| |||| || || || | |||||||| |||| Sbjct 667852 TTCAAAAAGAATCCACTCTCCACTTGGTGTTGAGGTTAAGAGGTGGTA 667805 Score = 132 bits (146), Expect = 8e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || ||||||||||||| || ||| | || ||||| | | | Sbjct 666664 TGCAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAGTG 666605 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || |||| || ||| |||||| ||| ||||||||| || || || ||||| | Sbjct 666604 ACACAATAGAAAACGTCAAAGCTAAAATTCAAGATAAAGAAGGAATCCCCCCAGATCAGC 666545 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || |||||||| || |||||| |||| ||| | |||| || |||| || || | Sbjct 666544 AAAGGCTTATTTTTGCCGGAAAACAACTAGAAGATGGTCGAACATTGTCAGACTACAACA 666485 Query 146212 TACAAAAAGAATCGAC 146227 |||| |||||||| || Sbjct 666484 TACAGAAAGAATCCAC 666469 Score = 132 bits (146), Expect = 8e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| |||| || || ||||||||| | || || |||| | | Sbjct 668260 TGCAGATTTTTGTTAAAACTCTAACTGGGAAGACAATTACTCTAGAAGTTGAACCAAGTG 668201 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||||||| |||||| ||| |||||||| |||||||| ||||| | Sbjct 668200 ATACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAGC 668141 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| || |||||| | || ||| | | || | | || ||||| | Sbjct 668140 AACGTCTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCGGACTATAACA 668081 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | || || || | | || ||||| |||| Sbjct 668080 TTCAAAAAGAATCTACACTTCACTTGGTGCTGAGGTTGAGAGGTGGTA 668033 Score = 129 bits (142), Expect = 9e-25 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| ||||| |||||||| || || | || || || | || | Sbjct 667804 TGCAAATTTTTGTCAAAACTTTAACTGGAAAAACCATCACATTAGAAGTTGAGCCTAGTG 667745 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || |||||||||| ||||| ||| |||||| || |||||||| || |||| Sbjct 667744 ACACCATAGAAAATGTAAAGGCAAAAATCCAAGATAAAGAGGGTATTCCACCTGACCAAC 667685 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | |||||||| || ||||| | || ||| | || ||| |||||||||| | Sbjct 667684 AGCGTTTAATTTTTGCCGGCAAACAGCTTGAAGATGGGCGTACATTATCAGATTATAACA 667625 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| ||| | ||| | ||||| | | |||||||| Sbjct 667624 TCCAAAAAGAATCTACTTTGCATCTTGTATTGAGGCTGAGAGGAGG 667579 Score = 116 bits (128), Expect = 6e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 146056 CAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATA 146115 |||| || ||||||||| | || || || || | ||||||||| ||||||| ||| | Sbjct 666331 CAGGCAAGACAATTACTTTAGAAGTTGAGCAGAGTGATACTATTGAAAATGTCAAAGCAA 666272 Query 146116 AAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAAC 146175 |||| ||| ||||| || || || |||||||| || | ||||||||||| || || | Sbjct 666271 AAATTCAAGACAAAGAGGGTATCCCTCCCGATCAGCAGCGTCTCATTTTTGCCGGCAAGC 666212 Query 146176 AATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATT 146235 || | || ||| |||| | |||| || || || ||||| ||||| ||| | |||| Sbjct 666211 AACTTGAAGATGGGCGAACCCTTTCAGACTACAACATTCAAAAGGAATCCACTCTTCATT 666152 Query 146236 TAGTATTACGATTAAGAGGAGG 146257 | ||| | || | |||||||| Sbjct 666151 TGGTACTCCGTCTGAGAGGAGG 666130 >seq6968 Length=4750 Score = 143 bits (158), Expect = 4e-29 Identities = 257/370 (69%), Gaps = 13/370 (4%) Strand=Plus/Plus Query 244010 AAATTTTATAGACAATGTAAA-GTAAGAGAACAATTAGATT---ATATTTACATAGTTAC 244065 ||||||||| ||||||||||| |||| | | || ||||| |||||||||||| || Sbjct 4214 AAATTTTATCGACAATGTAAAAGTAAAA-AGTAA--AGATTCATATATTTACATAGCAAC 4270 Query 244066 AACAAAATCTTATGCATCTAATAATAATTTCAAAATTGGTCATACTGATAATTTAAAACA 244125 |||| ||| || ||||| ||||| ||| | || |||||| | ||||||||| Sbjct 4271 AACACTTCACTATTCAAAGAATAACAATTTTAAAGTAGGACATACTAAAAATTTAAAAGC 4330 Query 244126 AAGATTATCTAATTTTAATACTGCTAAGAATTCTCAAGATTTATATTATTATTGTTATTT 244185 ||||||| || || |||||| | | |||||| | || || |||||||| ||||| Sbjct 4331 AAGATTAGCTGGTTATAATACGGGCAGAAATTCTAATGACTTGTATTATTACGTATATTT 4390 Query 244186 TGCAAAAGTTTATAATGGTAACAAACTTGACAAAATGATACAAGATTTATTAATTGACTT 244245 |||||||||| | | || | |||| ||| |||| ||| || | || || || Sbjct 4391 CAAAAAAGTTTATGAAGCAAAAGAGGTTGATAAATTGATTCAAAGAATACTCATAGATTT 4450 Query 244246 TAAAGACAAAAAAGATAAAGAACTTTATATAATGCACTATACTTATTTAGAAAAATGTGT 244305 |||||| | ||| |||||| |||| || | | ||| ||| | ||||| || Sbjct 4451 TAAAGATAGTAAACGCAAAGAAGTTTACATTCTTAATTATTTATATCTTCAAAAAATTGC 4510 Query 244306 TA---TAATAGCTAAAGAAAATTATAATGAACCTTATGATTATATAAATGATTTAATTAA 244362 | |||||| || | ||||| |||||| || |||| || |||||||||||| | Sbjct 4511 AAAATTAATAGTTA---ATAATTACAATGAATGTTTTGATGTGATGAATGATTTAATTGA 4567 Query 244363 AAATAATTTA 244372 ||| ||||| Sbjct 4568 AAAGGATTTA 4577 Score = 143 bits (158), Expect = 4e-29 Identities = 257/370 (69%), Gaps = 13/370 (4%) Strand=Plus/Minus Query 1346 TAAATTATTTTTAATTAAATCATTTATATAATCATAAGGTTCATTATAATTTTCTTTAGC 1405 ||||| |||| |||||||||||| || |||| || |||||| ||||| | || | Sbjct 4577 TAAATCCTTTTCAATTAAATCATTCATCACATCAAAACATTCATTGTAATTAT---TAAC 4521 Query 1406 TATTA---TAACACATTTTTCTAAATAAGTATAGTGCATTATATAAAGTTCTTTATCTTT 1462 ||||| | || ||||| | ||| ||| | | || |||| |||||| ||| Sbjct 4520 TATTAATTTTGCAATTTTTTGAAGATATAAATAATTAAGAATGTAAACTTCTTTGCGTTT 4461 Query 1463 TTTGTCTTTAAAGTCAATTAATAAATCTTGTATCATTTTGTCAAGTTTGTTACCATTATA 1522 | |||||||| || || | || ||| |||| ||| |||| | || | | ||| Sbjct 4460 ACTATCTTTAAAATCTATGAGTATTCTTTGAATCAATTTATCAACCTCTTTTGCTTCATA 4401 Query 1523 AACTTTTGCAAAATAACAATAATAATATAAATCTTGAGAATTCTTAGCAGTATTAAAATT 1582 ||||||| ||||| |||||||| || || | |||||| | | |||||| || Sbjct 4400 AACTTTTTTGAAATATACGTAATAATACAAGTCATTAGAATTTCTGCCCGTATTATAACC 4341 Query 1583 AGATAATCTTTGTTTTAAATTATCAGTATGACCAATTTTGAAATTATTATTAGATGCATA 1642 || ||||||| ||||||||| | |||||| || | ||| ||||| ||||| || ||| Sbjct 4340 AGCTAATCTTGCTTTTAAATTTTTAGTATGTCCTACTTTAAAATTGTTATTCTTTGAATA 4281 Query 1643 AGATTTTGTTGTAACTATGTAAATAT---AATCTAATTGTTCTCTTAC-TTTACATTGTC 1698 |||||| |||||||||||| ||||| || | | |||| ||||||||||| Sbjct 4280 GTGAAGTGTTGTTGCTATGTAAATATATGAATCT--TTACT-TTTTACTTTTACATTGTC 4224 Query 1699 TATAAAATTT 1708 ||||||||| Sbjct 4223 GATAAAATTT 4214 >seq435 Length=3082058 Score = 123 bits (136), Expect = 4e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || ||||||| | || ||||||||||| ||| |||| ||||| | Sbjct 740824 TGCATATTTTTGTAAAAACCCTGACTGGAAAAACAATAACTCTTGAAGTAGAGTCGTCTG 740765 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | | ||| ||| | ||||| ||| | ||||||| ||||| || ||||||| Sbjct 740764 ACACCATCAATATTGTGAAACAAAAAATTCAAGATGAAGAAGGAATTCCTCCAGATCAAC 740705 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || || ||||| ||||| || || ||||| || | || || |||||||| | | Sbjct 740704 AAAGGCTGATATTTGCGGGTAAGCAGTTGGATGACAAACGCACTCTATCAGATTATGACA 740645 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGG 146254 | ||||||||||| || | || | || |||| || ||||| Sbjct 740644 TTCAAAAAGAATCAACGCTTCACATGGTGCTACGTTTGAGAGG 740602 >seq13703 Length=2289824 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||| ||||| || |||||||||||| | |||||||| || ||||| || || ||| | Sbjct 2085286 AGGTATTCCCCCTGATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACG 2085227 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 ||| || |||||||||| || ||||| ||||| ||| | |||||||| | || || || Sbjct 2085226 AACTCTATCAGATTATAACATTCAAAAGGAATCTACTCTTCATTTAGTTCTTCGTTTGAG 2085167 Query 146252 AGGAGGT 146258 || ||| Sbjct 2085166 GGGTGGT 2085160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786003928886360