Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq4472 194 1e-44 seq435 179 3e-40 seq13703 104 2e-17 >seq4472 Length=7509737 Score = 194 bits (214), Expect = 1e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | ||||||||| ||||| || |||||||||||||||||||| |||| | Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || |||||||| |||||| | |||| | ||||||||| || ||| Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||||||||| | ||| ||| ||| |||| | || ||| |||| ||| Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || ||||||| ||||||||||| |||||||| Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 158 bits (174), Expect = 9e-34 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || ||||| ||||| || |||||||| ||||| || || || | Sbjct 668491 CCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAC 668550 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| || | ||| || ||||| | ||||| || |||||||| || ||| Sbjct 668551 AGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGA 668610 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || |||||||| || | ||| ||| ||| | || | |||||| | | || || Sbjct 668611 ATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACC 668670 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || ||||||||||||||||| || |||||||| ||||||||||| Sbjct 668671 TCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATTTT 668720 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | | || |||||||| | || |||||||| || ||||||||||| | | Sbjct 668263 CCTCCCCTTAGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAA 668322 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| ||||| || ||||||||| | || || | |||||| || || ||| Sbjct 668323 AGTGTACGGCCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGA 668382 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||||||||| | ||| || ||| |||| | |||||| |||| ||| Sbjct 668383 ATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACT 668442 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||||| || |||||||| || ||||| ||||| |||||||| Sbjct 668443 TCCAAGGTTATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 150 bits (166), Expect = 1e-31 Identities = 156/202 (77%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| ||| || ||||||||||| |||||||| ||||||||||| || || | Sbjct 666129 TCCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGA 666188 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||| || ||| || ||||| ||||| ||| | || | | |||||||| || || Sbjct 666189 AAGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGG 666248 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||||||||||||||||| |||||||| ||||||| |||| | ||| ||| | || | Sbjct 666249 GATACCCTCTTTGTCTTG-AATTTTTGCTTTGACATTTTCAATAGTATCACTCTGCTCAA 666307 Query 29738 CTTCAAGAGTTATAGTTTTGCC 29759 |||| | ||| || || ||||| Sbjct 666308 CTTCTAAAGTAATTGTCTTGCC 666329 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || | || |||||| || || ||||||||||||||||||||||| || | | Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || ||||| || ||| | || | ||||||||||| || ||| Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| ||| || | || | ||| ||| | | |||||| Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACT 667986 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || |||||||| ||||| | ||||| || || |||||||| Sbjct 667987 TCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| | || || | |||||| ||||| || || |||||||| || || | Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 666954 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || || ||||| ||||| | || | ||| || ||||| || ||| Sbjct 666955 AGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGA 667014 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| ||||| |||||| | ||| || |||| | ||| ||| | ||||||| Sbjct 667015 ATTCCTTCTTTATCTTG-AATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTAC 667073 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | |||||| ||||||||||| || ||||| |||||||||||||| Sbjct 667074 TTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 140 bits (154), Expect = 2e-28 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG- 29617 |||||| | || | ||| || | |||||| ||||||||||| || ||||| || || | Sbjct 666438 TCCTCCACGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGA 666497 Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677 |||| || ||| ||| || |||||||| || ||| | || | ||||||||||| || | Sbjct 666498 CAAT-GTTCGACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGG 666556 Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 | || || ||||| ||||| |||||| | |||||| |||||| |||||| | ||| Sbjct 666557 GGATTCCTTCTTTATCTTG-AATTTTAGCTTTGACGTTTTCTATTGTGTCACTGGGCTCT 666615 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | ||| |||||||| || |||| || ||||| || || ||||| Sbjct 666616 ACCTCTAAAGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| | || || | ||| | || ||||||||||| ||||||||||| | Sbjct 667578 TCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGA 667637 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || || ||| || || |||||||| ||| | || || | || || || || || Sbjct 667638 TAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGG 667697 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||||||| ||||| | |||| || ||| |||||| |||||| | | || || Sbjct 667698 AATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAAC 667757 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || ||||| |||||||| ||||| ||||| || ||||| Sbjct 667758 TTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 131 bits (144), Expect = 1e-25 Identities = 161/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATC 29633 || |||||||| || |||||||||||||| || || ||||| | |||| || | ||| Sbjct 667366 AGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAAT-GTTCTTCCATC 667424 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | || || ||||| | ||||| ||||| ||||| || || || || || || || Sbjct 667425 TTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTTATC 667484 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 ||| |||||||| ||| ||| |||| | || ||| | | |||||||| | |||||| | Sbjct 667485 TTG-AATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTATGG 667543 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || || ||||| ||||| ||||| || |||||| Sbjct 667544 TCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||| ||| || || ||||||||||| ||||| ||||| | | ||| || ||| || Sbjct 667141 ACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAGAGGGTTCGGCCATCTTCA 667200 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 || || || |||||| | |||| | || ||||| || |||||||| || || ||||| Sbjct 667201 AGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATACCTTCCTTATCTTG- 667259 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||| ||| |||||| || ||| |||| ||||| || || |||||||| Sbjct 667260 AATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACTTCTAGTGTAATAGTTTT 667319 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | ||||| |||||||| ||||| Sbjct 667320 TCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 >seq435 Length=3082058 Score = 179 bits (198), Expect = 3e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29563 CCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATG 29622 || |||||||| ||||||| |||||||| |||||||||||||||| |||||| | | Sbjct 740602 CCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGA 740661 Query 29623 GTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATA 29682 ||||| ||||| | || || || ||| |||||| ||||| ||||| || ||||| Sbjct 740662 GTGCGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATT 740721 Query 29683 CCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCA 29742 || |||| ||||| | ||||||||| ||| | | | |||||||| ||||||||| Sbjct 740722 CCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCA 740781 Query 29743 AGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||||||| ||||| ||||| | |||||| ||||| || |||||||| Sbjct 740782 AGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 >seq13703 Length=2289824 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||||||| || || |||||||| || ||||| ||||||||||||||||| | Sbjct 2085161 CCACCCCTCAAACGAAGAACTAAATGAAGAGTAGATTCCTTTTGAATGTTATAATCTGAT 2085220 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | |||||||| ||| | || |||||||| ||||| || ||| Sbjct 2085221 AGAGTTCGTCCATCTTCCAACTGTTTGCCGGCAAAAATTAATCTTTGTTGATCAGGGGGA 2085280 Query 29680 ATACC 29684 ||||| Sbjct 2085281 ATACC 2085285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385141579896153