Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2837 134 2e-26 >seq2837 Length=3397241 Score = 134 bits (148), Expect = 2e-26 Identities = 238/347 (69%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 142960 TTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCTTGCATA 143019 ||||| | ||| | ||||| ||| |||| |||||| |||| ||||||| || | |||| Sbjct 2847603 TTTATTCGGATGATGATGAATGGGCTACCTGGAAAGAAATGTCCGATCCAGTTCTTCATA 2847544 Query 143020 TAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACGTTAG 143079 | |||| | | ||||| |||| | || || |||| || || || ||||| || | Sbjct 2847543 TCCAACTACGCCGTTGGGCTGATGCTCTTATTGTAGCCCCACTAGATGCTAATACTTTGG 2847484 Query 143080 CAAAAATAGCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATA 143139 | ||||| || || || ||||| || ||| | || || | | | ||||| |||||| Sbjct 2847483 CTAAAATGGCTAATGGCATATGTGACAATCTTCTCACGTGCACCATCAGAGCTTGGGATC 2847424 Query 143140 TAAATAAACCTCTTATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTA 143199 ||||| || |||| ||||| || ||||| | |||||||| || || ||| Sbjct 2847423 GCCTAAAACCACTGTTTTTCTGTCCTGCCATGAACACATACATGTGGGACCACCCACTTA 2847364 Query 143200 CAGAAAAACATATAGATGCTTTAAAACATATGGGTTTCATAGAAATAGAATGCATAGaaa 143259 | | ||||||| | | |||||||| | |||||| | || ||| || | | | Sbjct 2847363 CGGCAAAACATGTCAAAACTTTAAAAGAGTTGGGTTATTTTGAGATACCTTGTGTTGCCA 2847304 Query 143260 aaaaaCTAGCCTGCGGAGACATAGGAAATGGTGCTATGGCAGAAGTT 143306 ||| | | || ||||| || | || |||||| ||||||||||||| Sbjct 2847303 AAAGATTGGCTTGCGGTGATGTTGGTTATGGTGGTATGGCAGAAGTT 2847257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903224498782880