Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4472 100 3e-16 >seq4472 Length=7509737 Score = 100 bits (110), Expect = 3e-16 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 ||||| | || || ||||||||||| || ||||| | ||| ||| || |||| Sbjct 668284 AAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAA--GTGTACGGCCATCTTCGA 668341 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| || |||| | || |||||||| || || || ||||| ||||| || Sbjct 668342 GCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCTTTGTCTTGGA 668401 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 | || ||| | | |||| ||||| |||| || || || | ||| | ||| |||| Sbjct 668402 TTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTTATGGTCTTGC 668461 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| |||||| || || |||||||| Sbjct 668462 CAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||| ||||| || |||||||||||| || || || || | | Sbjct 667372 AAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCCATCTTCTAAC 667431 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| |||| | || || || || ||||||||||||||||| || ||| Sbjct 667432 TGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTTATC-TTGAAT 667490 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||||| || | | |||| || || | ||||| || || | || | ||| || || Sbjct 667491 TTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTATGGTCTTTCC 667550 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| | |||||| || ||||| ||||| Sbjct 667551 GGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATC-GCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||| ||||||||||| ||||| || | | || | ||| | || || || || || || Sbjct 666469 GTGGATTCTTTCTGTATGTTGTAGTCTGACAATGTTCGACCA-TCTTCTAGTTGTTTTCC 666527 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 || |||| |||| ||||| || || ||||| ||||| || || ||| ||| || | Sbjct 666528 GGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCCTTCTTTATC-TTGAATTTTAGCTT 666586 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| ||||||| || || | |||| ||||| || || |||| Sbjct 666587 TGACGTTTTCTATTGTGTCACTGGGCTCTACCTCTAAAGTGATAGTTTTTCCTGTTAGAG 666646 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || |||||||| |||||| || Sbjct 666647 TCTTAACGAAAATTTGCATGCCT 666669 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| |||||||| || || || ||| | || || | ||||| || Sbjct 668521 GTAGATTCTTTCTGAATATTGTAGTCAGACAGGGTACGACCA-TCTTCCAATTGCTTACC 668579 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||| || || || || ||||| ||||| ||||||| || Sbjct 668580 AGCGAAGATCAACCTCTGCTGATCAGGTGGAATTCCTTCTTTGTCCTGGATCTTTGCTTT 668639 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| |||||| | ||||| || || | |||| |||||||| || | || Sbjct 668640 CACATTCTCAATCGTGTCACTAGGCTCAACCTCTAGTGTGATAGTTTTGCCAGTTAATGT 668699 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 668700 CTTAACAAAAATCTGCAT 668717 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| ||||| || || || || || | ||| ||| | || || ||||| || || Sbjct 667837 GTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCA-TCTTCAAGCTGTTTACC 667895 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||| || ||||| || ||||||||||| ||| ||| |||| Sbjct 667896 TGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGGAT-TTTGGCTT 667954 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| || || | ||||| || || | |||| ||||| || || || | Sbjct 667955 TAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGATAGTTTTACCAGTAAGTG 668014 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| |||||||||||||| Sbjct 668015 TTTTGACGAAAATCTGCAT 668033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483320895048920