Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2689 122 2e-22 seq14474 87.8 4e-12 seq8847 87.8 4e-12 >seq2689 Length=8589770 Score = 122 bits (134), Expect = 2e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 305331 TTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAG 305390 || |||||||| | |||||| | ||||| |||||||||||||||| ||| | | || Sbjct 7076313 TTGTGTTCAATCGACAACCAACTCTGCACAAAATGTCTATGATGGGTCACCGCATAAGAG 7076254 Query 305391 TATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATT 305450 | ||| | | | ||||| ||| | ||| |||||| || || |||||||| |||| Sbjct 7076253 TTTTACCATGGTCTACATTCCGAATGAATTTAAGTGTGACAACTCCATATAATGCTGATT 7076194 Query 305451 TTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 |||||||||||||||||||| | ||||| |||||||| Sbjct 7076193 TTGATGGAGATGAAATGAATCTTCATGTGCCTCAATC 7076157 >seq14474 Length=2471489 Score = 87.8 bits (96), Expect = 4e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 110988 TATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATC 111047 |||||||| ||||| || || | |||||| ||| ||||| || | |||| ||| Sbjct 1694174 TATGAAAAGGAAGGAAAATTCAGAAAACAAGTTCGGGCTCATGAGGTCTGGTATGCAATT 1694115 Query 111048 CTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGC 111107 ||||||||||| || || ||||||||||| || ||||| ||||| | || | Sbjct 1694114 ATTGAATCACAAACGGAGACAGGAACTCCTTACATGTTGTACAAAGACGCTTGCAACAGA 1694055 Query 111108 AAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 |||||||| ||| || |||| |||||||| | || || |||||| Sbjct 1694054 AAATCTAACCAACAAAACCTAGGTACAATTAAATGCAGCAACTTGTGC 1694007 >seq8847 Length=10843265 Score = 87.8 bits (96), Expect = 4e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 305405 ACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAA 305464 || ||||| || |||| | ||| ||||| || || ||||| |||||||||||||||||| Sbjct 2684111 ACTTTTCGTTTTAATGAATGTGTCTGTACTCCCTACAATGCTGATTTTGATGGAGATGAA 2684170 Query 305465 ATGAATATGCATGTACCTCAA 305485 |||||||| ||| |||||||| Sbjct 2684171 ATGAATATTCATTTACCTCAA 2684191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186561398557213