Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4472 125 2e-23 seq435 89.7 1e-12 >seq4472 Length=7509737 Score = 125 bits (138), Expect = 2e-23 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||||| | || || ||||| || ||||||||||| ||| | ||| Sbjct 667118 CAGATATTTGTGAAAACATTGACTGGCAAAACAATAACTTTGGAAGTAGAACCTAGTGAT 667059 Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| ||||| || ||| |||||||| |||||||||||| || || || Sbjct 667058 ACTATTGAAAACGTAAAAGCCAAA-ATTCAAGATAAAGAAGGAATTCCTCCCGATCAACA 667000 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||||| ||||| ||||| ||| | || ||||| | || | | || |||||| | Sbjct 666999 GAGACTTATTTTCGCTGGAAAACAGCTAGAGGATGGTCGAACACTCTCAGACTACAACAT 666940 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAG 206384 ||||| ||||| || ||||| ||||||||||| Sbjct 666939 TCAGAAGGAGTCCACACTTCATCTTGTTTTGAG 666907 Score = 118 bits (130), Expect = 3e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||||||||| |||||||| || || || ||||||| | ||| Sbjct 666650 AAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAGTGACACAATAGAAAAC 666591 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| ||||||||||| || || ||||| ||||| || Sbjct 666590 GTCAAAGCTAAA-ATTCAAGATAAAGAAGGAATCCCCCCAGATCAGCAAAGGCTTATTTT 666532 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||||| || | |||||||| | || ||| | || |||||| | |||||||| || Sbjct 666531 TGCCGGAAAACAACTAGAAGATGGTCGAACATTGTCAGACTACAACATACAGAAAGAATC 666472 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| ||||| |||| || || Sbjct 666471 CACACTTCATCTTGTCCTGAGGCTGCG 666445 Score = 105 bits (116), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| |||||| || ||||||||||| || || | ||||| ||| ||| Sbjct 667346 CAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGTGAT 667287 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| || ||||| ||| || || || Sbjct 667286 ACCATAGAAAATGTGAAAGCTAAA-ATTCAAGATAAGGAAGGTATTCCACCCGATCAACA 667228 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || || || || || |||||| | |||||||| | || | | ||||||||| | Sbjct 667227 GCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAACAT 667168 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| ||||| || || || |||||||| |||||| Sbjct 667167 CCAAAAAGAATCTACACTCCATCTGGTTTTGAGGCTTCGA 667128 Score = 105 bits (116), Expect = 2e-17 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || || ||||| ||||| || | ||| ||| | ||| Sbjct 667562 AAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGAGCCTAGTGATACAATTGAAAAT 667503 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||| |||||||| || ||||| || || || ||||| | || || Sbjct 667502 GTGAAAGCAAAA-ATTCAAGATAAGGAAGGCATCCCTCCAGATCAACAAAGGTTGATTTT 667444 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||||| ||||||||||| || ||| |||||||||| |||| ||||| || Sbjct 667443 CGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACAATATCCAAAAAGAATC 667384 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || || || | ||| | ||| Sbjct 667383 CACCCTCCATTTGGTTCTAAGA 667362 Score = 87.8 bits (96), Expect = 4e-12 Identities = 155/223 (70%), Gaps = 5/223 (2%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| ||| || || | || || ||||| ||||| | || || || Sbjct 668720 AAAATG---CAGATTTTTGTTAAGACATTAACTGGCAAAACTATCACACTAGAGGTTGAG 668664 Query 206224 AGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 | |||||| | || || |||||||| ||| || || |||||||||||| || Sbjct 668663 CCTAGTGACACGATTGAGAATGTGAAAGCAAA-GATCCAGGACAAAGAAGGAATTCCACC 668605 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || || || | |||||||| || ||||| ||||||||||| | || || | || Sbjct 668604 TGATCAGCAGAGGTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGTACCCTGTCTGA 668545 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| | |||||||| ||||| |||||| | ||| | ||| Sbjct 668544 CTACAATATTCAGAAAGAATCTACACTTCACTTGGTTCTAAGA 668502 >seq435 Length=3082058 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||| | ||||| || |||||||| || | Sbjct 740810 AAAACCCTGACTGGAAAAACAATAACTCTTGAAGTAGAGTCGTCTGACACCATCAATATT 740751 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||| |||||||| ||||||||||| || || ||||| || || || Sbjct 740750 GTGAAACAAAAAATTCAAGATGAAGAAGGAATTCCTCCAGATCAACAAAGGCTGATATTT 740691 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||| || | | ||| | | ||||| || | || ||||| || Sbjct 740690 GCGGGTAAGCAGTTGGATGACAAACGCACTCTATCAGATTATGACATTCAAAAAGAATCA 740631 Query 206365 ACTCTTCAC 206373 || |||||| Sbjct 740630 ACGCTTCAC 740622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181570456007893