Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4472 114 1e-20 seq435 96.9 3e-15 >seq4472 Length=7509737 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||||| ||| | | || |||||||| |||||||| || | ||| || ||| Sbjct 667137 CAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAGAGGGTTCGGCCATC 667196 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| ||||| ||||| | | | || |||||||||||||| || || || ||||| ||||| Sbjct 667197 TTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATACCTTCCTTATC 667256 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||||| | ||| | ||||| | || || ||||| | || | || Sbjct 667257 TTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACTTCTAGTGTAATAGT 667316 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || ||||||||||| | || || ||||| Sbjct 667317 TTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| ||||| || | | || |||||||||||||| ||||| | || || ||| Sbjct 667821 CAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCATC 667880 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| ||||||||||| | | |||| || | || ||||| ||||| || ||||| || || Sbjct 667881 TTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTC 667940 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||||| ||| | | || | |||||| | ||||| ||||| | || | || Sbjct 667941 TTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGATAGT 668000 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||| || ||||| | |||||||||||| Sbjct 668001 TTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| | |||||| | ||| | | ||||| || |||||||||||||| | || Sbjct 666900 ACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGT 666959 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| || |||||||| || | | || || | ||||||||| ||||| || || Sbjct 666960 TCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCC 667019 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||||||||| |||||| ||| | | ||| | |||||| | || || ||||| | Sbjct 667020 TTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACTTCCAA 667079 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| ||||||| ||||| | || |||||||| Sbjct 667080 AGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || | ||||| ||||||| ||||| ||||| ||||| | ||| || ||| Sbjct 666681 CAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGGCCATC 666740 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | ||| || |||| | |||| ||||| ||||| || ||||| || ||||||||||| Sbjct 666741 TTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCTTCTTTATC 666800 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 || || ||| | | ||| | ||| || | || || || || | || | || Sbjct 666801 TTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTAATAGT 666860 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || || |||||||||| ||| |||||||| Sbjct 666861 TTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| | | ||||||||| | | | || |||||||| || ||||| ||| || || Sbjct 667356 ACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGT 667415 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 | |||||| | ||| ||||| | | || | | |||||||||||||| ||||| Sbjct 667416 TCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCC 667475 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| ||||| ||||||| ||||| | ||| | ||||| | ||||| ||||| | Sbjct 667476 TTCCTTATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAA 667535 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || || | |||||| | ||||| ||||| Sbjct 667536 AGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 98.7 bits (108), Expect = 9e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || || ||||||||||||||||| | ||| ||| |||||| Sbjct 666148 ACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTTCGCCCATCTTCA 666207 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || || || |||| | | || |||||||| ||||| ||||| || || ||||| || | Sbjct 666208 AGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGGATACCCTCTTTGTCTTGA 666267 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTC 132078 |||||| ||| | | ||| | |||||| || |||| ||||| Sbjct 666268 ATTTTTGCTTTGACATTTTCAATAGTATCACTCTGCTCAACTTC 666311 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| || || || |||||| || ||||| |||| | Sbjct 666472 GATTCTTTCTGTATGTTGTAGTCTGACAATGTTCGACCATCTTCTAGTTGTTTTCCGGCA 666531 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | || |||||||| || || ||||||||||| |||||| ||| | Sbjct 666532 AAAATAAGCCTTTGCTGATCTGGGGGGATTCCTTCTTTATCTTGAATTTTAGCTTTGACG 666591 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | ||||| || || | || | ||||| || || ||||| || Sbjct 666592 TTTTCTATTGTGTCACTGGGCTCTACCTCTAAAGTGATAGTTTTTCCTGTTAGAGTCTTA 666651 Query 132110 ATGAAAATCTGCATGACT 132127 | |||||| |||||| || Sbjct 666652 ACGAAAATTTGCATGCCT 666669 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || |||||||||||||| ||||| | || || |||||| || ||||| || | | Sbjct 668068 GATTCTTTTTGAATGTTATAGTCCGAAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCA 668127 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| || ||||| || || || |||||||| || ||||| ||| | Sbjct 668128 AAAATCAGACGTTGCTGATCAGGTGGAATACCTTCTTTGTCTTGGATTTTAGCTTTTACA 668187 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | || || ||||| | || | || || ||||| |||||||| Sbjct 668188 TTTTCAATTGTATCACTTGGTTCAACTTCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTA 668247 Query 132110 ATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 668248 ACAAAAATCTGCAT 668261 >seq435 Length=3082058 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||| ||||||||||||| || || | || || || || | ||| ||||| | Sbjct 740630 TTGATTCTTTTTGAATGTCATAATCTGATAGAGTGCGTTTGTCATCCAACTGCTTACCCG 740689 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | | || || | |||||||||||||| || ||||||| ||| |||||||||||||| Sbjct 740690 CAAATATCAGCCTTTGTTGATCTGGAGGAATTCCTTCTTCATCTTGAATTTTTTGTTTCA 740749 Query 132048 -ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTT 132106 | | || | || || | || ||| ||||| | || | ||||| |||||||| ||| Sbjct 740750 CAATATT-GATGGTGTCAGACGACTCTACTTCAAGAGTTATTGTTTTTCCAGTCAGGGTT 740808 Query 132107 TTTATGAAAATCTGCAT 132123 |||| ||||| ||||| Sbjct 740809 TTTACAAAAATATGCAT 740825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476512702337880