Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq4472 123 2e-23 >seq4472 Length=7509737 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| ||||| || || || |||||||| || | ||| ||| || | Sbjct 667578 AATGCAAATTTTTGTGAAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGAGCCTAG 667519 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | |||||| ||||||| || || |||||| | || ||||| Sbjct 667518 TGATACAATTGAAAATGTGAAAGCAAAAATTCAAGATAAGGAAGGCATCCCTCCAGATCA 667459 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||||||| | |||| || || || || ||||||||| | ||| || ||||||||| Sbjct 667458 ACAAAGGTTGATTTTCGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACAA 667399 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || || ||||| || | || || || || || Sbjct 667398 TATCCAAAAAGAATCCACCCTCCATTTGGTTCTAAGATTGCGTGGTGG 667351 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||||||||||||||| || || || ||||| |||||| | Sbjct 667121 ATGCAGATATTTGTGAAAACATTGACTGGCAAAACAATAACTTTGGAAGTAGAACCTAGT 667062 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| |||||| || |||||||| | || |||||| Sbjct 667061 GATACTATTGAAAACGTAAAAGCCAAAATTCAAGATAAAGAAGGAATTCCTCCCGATCAA 667002 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 || || ||||||| || || ||||| |||| ||| || || ||| | || |||| Sbjct 667001 CAGAGACTTATTTTCGCTGGAAAACAGCTAGAGGATGGTCGAACACTCT--CAGACTACA 666944 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||| || || || || ||||| ||| | || |||||||| || || || Sbjct 666943 ACATTCAGAAGGAGTCCACACTTCATCTTGTTTTGAGGTTGCGTGGTGG 666895 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||||||||| | ||||| ||||| ||||| | ||| ||||| | Sbjct 668261 ATGCAGATTTTTGTTAAAACTCTAACTGGGAAGACAATTACTCTAGAAGTTGAACCAAGT 668202 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| ||||| ||||||||||| | || |||||| Sbjct 668201 GATACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAG 668142 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || |||| ||| || |||||| | |||||| | ||| | || || ||| Sbjct 668141 CAACGTCTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCGGACTATAAC 668082 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||||||||| || || || ||||||| |||| || Sbjct 668081 ATTCAAAAAGAATCTACACTTCACTTGGTGCTGAGGTTGAGAGGTGG 668035 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| ||||| || | || || || || || || | || ||| ||| | Sbjct 666665 ATGCAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAGT 666606 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | || ||| |||||| || |||||||| | ||| ||||| Sbjct 666605 GACACAATAGAAAACGTCAAAGCTAAAATTCAAGATAAAGAAGGAATCCCCCCAGATCAG 666546 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||||||||||| ||| || |||||| |||||||| | ||| || || |||||| Sbjct 666545 CAAAGGCTTATTTTTGCCGGAAAACAACTAGAAGATGGTCGAACATTGTCAGACTACAAC 666486 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||||| |||||||| ||||| ||| | || ||||| | || |||||| Sbjct 666485 ATACAGAAAGAATCCACACTTCATCTTGTCCTGAGGCTGCGTGGAGGA 666438 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| ||||| || |||||| | ||||| || || || || | ||| ||| || | Sbjct 668033 ATGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGT 667974 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| ||||| ||||| ||||| | || |||||| Sbjct 667973 GATACTATTGAGAACGTTAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAG 667914 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||||||||| | ||| || ||||| | |||||| | ||| | || || ||| Sbjct 667913 CAAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAAC 667854 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || || || || || ||||||||| |||| || Sbjct 667853 ATTCAAAAAGAATCCACTCTCCACTTGGTGTTGAGGTTAAGAGGTGG 667807 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||| ||||||||||||||||| ||| ||||| |||||| | Sbjct 668489 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGT 668430 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || ||||| ||||||||||| | ||| ||| || Sbjct 668429 GACACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAG 668370 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 ||| | | |||| ||| ||||| || | |||||| | | ||| | ||||| | Sbjct 668369 CAACGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTT--CAGATTATA 668312 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||||| |||||||| || | ||||| ||| | || || | ||||| Sbjct 668311 ACATACAGAAAGAATCAACTTTGCATTTGGTACTCAGACTAAGGGGAGG 668263 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| |||| || || || ||||| | ||| ||||| | Sbjct 667349 ATGCAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGT 667290 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | |||||| |||||| || || ||||| | || |||||| Sbjct 667289 GATACCATAGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCCGATCAA 667230 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || |||| ||| || || || | |||||| ||| | ||||||||| Sbjct 667229 CAGCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAAC 667170 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||||||||| ||| | || |||||| | ||||| || Sbjct 667169 ATCCAAAAAGAATCTACACTCCATCTGGTTTTGAGGCTTCGAGGTGG 667123 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||| ||||||||||| ||||| |||||||| || || || | || || || Sbjct 668720 AAAATGCAGATTTTTGTTAAGACATTAACTGGCAAAACTATCACACTAGAGGTTGAGCCT 668661 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 | || | ||| | |||||| ||| || ||||||||||| | || |||| Sbjct 668660 AGTGACACGATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGAATTCCACCTGAT 668601 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 || || ||| | || | || || || ||||| |||||| | || || || ||| Sbjct 668600 CAGCAGAGGTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGTACCCTGTCTGACTAC 668541 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||||||||| || || || | || || ||||||| Sbjct 668540 AATATTCAGAAAGAATCTACACTTCACTTGGTTCTAAGATTGAGAGGAGG 668491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402248532220064