Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4472 134 1e-26 seq435 116 4e-21 >seq4472 Length=7509737 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | | || ||| | ||| || || ||||| ||||||||||| ||||| | Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || || ||||| || |||||||||| ||| |||||||| || || Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| ||||| ||| || || | ||| || | ||| || Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| || || || |||| ||||||||| ||||| ||||| Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 125 bits (138), Expect = 7e-24 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||||||||| || || | || | || || |||||||||||||||||||||||||| Sbjct 666128 TTCCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTG 666187 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| | || || || || ||||| |||||||| | ||||||||||||||| | Sbjct 666188 AAAGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAG 666247 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 | || || ||||| |||||||||||| |||||| Sbjct 666248 GGATACCCTCTTTGTCTTGAATTTTTGCTTTGAC 666281 Score = 123 bits (136), Expect = 3e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||| | || | || || || || || |||||||| || || ||||||||||| | Sbjct 666437 TTCCTCCACGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTG 666496 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| | | || || || || ||||| || |||||||| | | |||||||| || Sbjct 666497 ACAATGTTC-GACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGG 666555 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || |||||||| ||||||||||| |||||| || | |||||| | || Sbjct 666556 GGGATTCCTTCTTTATCTTGAATTTTAGCTTTGACGTTTTCTATTGTGTCACTGGGCTCT 666615 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || ||||| || |||| ||| ||||||||||||||||| Sbjct 666616 ACCTCTAAAGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||||||| | |||||| || |||| || || |||||||| ||||| ||||| Sbjct 666667 CCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGAT 666726 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || | ||| || || ||||| |||| ||| || || ||||| || Sbjct 666727 AAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 666786 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| || || ||| || || | ||||| | ||| || Sbjct 666787 ATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACC 666846 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||| ||||| || |||| |||||| ||||| || ||||| Sbjct 666847 TCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||||||||| || | ||| || || || | || ||||| ||||| ||||| || || Sbjct 667577 TTCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTG 667636 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | || || ||||||||||| |||||||| |||||||| || || || | Sbjct 667637 ATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTG 667696 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| ||||| |||||| || || || | ||||| | || | Sbjct 667697 GAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAA 667756 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || |||||||| || ||||||||||| || ||||||||||| Sbjct 667757 CTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || | ||| || || || || || ||||| ||||| |||||||| || Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| || || |||||||||| |||||| |||||||| || Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||||||||| ||| || || | || || | ||| || Sbjct 667243 ATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACT 667302 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| ||||| || || | |||||| || || |||||||| Sbjct 667303 TCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTGAGAGTCGTCGAGCTG 134569 || || |||||||| ||||| || ||||| ||| ||| | | | | || || | ||| Sbjct 667375 TGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCCA-TCTTCTAACTG 667433 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || |||||||| | || ||||| || || |||||||| || ||||||||||| Sbjct 667434 CTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTTATCTTGAATTTT 667493 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | ||| || || | ||| || | || || || | ||| ||||| || ||||| Sbjct 667494 TGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTATGGTCTTTCCGGT 667553 Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714 ||||||||| || |||||||||||| Sbjct 667554 TAAAGTTTTCACAAAAATTTGCATT 667578 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | | |||||| | ||| || |||||||| ||||||||||| ||||| | Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || |||||||| |||||||| || | | |||||||| || || Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| ||||| ||| || || | || || | || || Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACT 667986 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || |||||||| || | ||||| |||||||| ||||| Sbjct 667987 TCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560 ||| || || || || ||||| ||||| |||||||||||||| | || || || Sbjct 666909 CAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTTCGACCATC 666968 Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620 || |||||||| || || ||||| | | ||| |||||||| || || |||||||| || Sbjct 666969 CTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATC 667028 Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGG 134679 ||||||||| ||| | || | |||| || || | ||| || || | ||| || | Sbjct 667029 TTGAATTTTGGCTTTTA-CGTTTTCAATAGTATCACTAGGTTCTACTTCCAAAGTTATTG 667087 Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| || || || ||||| || || || ||||| Sbjct 667088 TTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 >seq435 Length=3082058 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134490 CCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACG 134549 ||||| | || | ||| | ||| ||||| ||||| |||||||||| || || | Sbjct 740602 CCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGA 740661 Query 134550 GTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATG 134609 ||| | ||| || | ||| || || ||||| |||| | || ||||| || || || Sbjct 740662 GTGCGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATT 740721 Query 134610 CCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCG 134669 ||||||| ||||||||||||||||| || | | ||||| ||||| || || || Sbjct 740722 CCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCA 740781 Query 134670 AGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || ||||| || || | ||||| || ||||| |||||||| Sbjct 740782 AGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505293953103160