Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4472 136 3e-27 >seq4472 Length=7509737 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || | || ||| |||| ||| | ||||| |||||||| || ||||| || Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| ||||| ||||| || |||| |||||||||||||| || || Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || ||||| || || ||||| |||||| || || | | ||||||| Sbjct 667243 ATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACT 667302 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| || |||| ||| || ||||||||||| ||||| ||||||||| Sbjct 667303 TCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCATA 667350 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| | || || |||||| | ||| || ||||| |||||||| || || || || | | Sbjct 667579 CCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGAT 667638 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 |||| ||| | ||||| |||||||| ||||| |||| | ||||||||| || || || Sbjct 667639 AATGTA-CGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGG 667697 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||||||||| ||| || || | |||||| ||||| | | ||||| Sbjct 667698 AATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAAC 667757 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| || || | ||| || || | |||||| ||||| ||||||||| Sbjct 667758 TTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCATA 667806 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||||| ||| || | ||| | || || || || ||||| |||||||| Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 666954 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| || | || || |||||||| || ||| |||| || | ||||||||| || || Sbjct 666955 AGTGTT-CGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGG 667013 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || |||||||| || ||| ||| | | |||| | ||| || | | ||| || Sbjct 667014 AATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTAC 667073 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| | |||||| | |||||| |||| ||||||||||| || |||||| Sbjct 667074 TTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCATA 667122 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||||| || ||||| || | ||||| ||||||||||| || ||||| Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| || ||||| || || |||| ||||| || ||||| || || Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| ||||| || ||| || ||| | |||| | || || | | ||||||| Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 |||||||| || | || || || |||||||| ||||| || |||||| || Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCATACCT 668265 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||||||||| || || || ||||| || || || || || | | || | ||||| Sbjct 668280 TACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGGCCATCTTC 668339 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||| || || || |||| | ||| || || || || || | ||| ||||| || Sbjct 668340 GAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCTTTGTCTTG 668399 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| || || | |||| | ||||| ||| ||||||||| | ||||| | || Sbjct 668400 GATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTTATGGTCTT 668459 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 ||| |||| |||||| |||||||| |||||| || || Sbjct 668460 GCCAGTCAAAGTTTTGACAAAGATCTGCATACCTCCT 668496 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| | | |||||||| | || || |||||||| |||||||| ||| | Sbjct 667351 CCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGAC 667410 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | | ||||| | ||| ||||| ||| |||| | | |||||||| || || Sbjct 667411 AATGTTCTTC-CATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGG 667469 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || ||||| || || ||||| |||| | || || | | || || Sbjct 667470 GATGCCTTCCTTATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTAC 667529 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| |||||| | || || || | |||||||||||| |||||||| Sbjct 667530 TTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | ||||||||| | || || || |||||||| |||||||| Sbjct 666130 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAA 666189 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||| | ||||| || || || ||||| ||||||||||||| ||||| || || Sbjct 666190 AGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGG 666249 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||| || || || ||| | |||| | ||| || | |||||| Sbjct 666250 ATACCCTCTTTGTCTTGAATTTTTGCTTTGACATTTTCAATAGTATCACTCTGCTCAACT 666309 Query 27201 TCTAGAGTTATAGATTTGCC 27220 |||| ||| || | ||||| Sbjct 666310 TCTAAAGTAATTGTCTTGCC 666329 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| | | ||||| || | ||||| ||||| |||||||||||||| | Sbjct 668491 CCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAC 668550 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| | || ||||| ||| | || | | ||| ||||| || || Sbjct 668551 AGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGA 668610 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || |||||| ||||| | || | ||||| | | ||||| Sbjct 668611 ATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACC 668670 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || |||| |||||| || | || || ||||| || ||||| Sbjct 668671 TCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCAT 668717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGC 27089 |||| ||| ||||| || | || || ||||||||||| || ||||| | |||| Sbjct 667816 AACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGA 667875 Query 27090 TCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCT 27149 | ||||| ||||||||||| || | || || | || ||||| || || | || || Sbjct 667876 CCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCC 667935 Query 27150 TTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTT 27209 || || ||| ||| ||| | | | || | ||| || | | || ||||||| || Sbjct 667936 TTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTG 667995 Query 27210 ATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| ||| || || || ||||| || || || |||||| Sbjct 667996 ATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCATA 668034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424848777444696