Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq2837 111 2e-19 seq6011 82.4 9e-11 >seq2837 Length=3397241 Score = 111 bits (122), Expect = 2e-19 Identities = 183/264 (69%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 89169 GACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAACTTAGGAGG 89228 || |||||| ||| ||||||||| | | |||||| || | ||||| |||| | | Sbjct 2847589 GATGAATGGGCTACCTGGAAAGAAATGTCCGATCCAGTTCTTCATATCCAACTACGCCGT 2847530 Query 89229 TGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGATAGCTAAT 89288 ||||||||| ||||| | || |||||| ||||||||| | || || || |||||| Sbjct 2847529 TGGGCTGATGCTCTTATTGTAGCCCCACTAGATGCTAATACTTTGGCTAAAATGGCTAAT 2847470 Query 89289 GGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGATATATCAAAGCCCCTT 89348 || ||||| ||||| | || || | | | || || |||||| ||| || || Sbjct 2847469 GGCATATGTGACAATCTTCTCACGTGCACCATCAGAGCTTGGGATCGCCTAAAACCACTG 2847410 Query 89349 ATTTTTTGTCCTGCCATGAATACTCTAATGTGGGAACATCCTATTACTGAATCACAAATA 89408 |||| |||||||||||||| || |||||||| || || |||| | | ||| | Sbjct 2847409 TTTTTCTGTCCTGCCATGAACACATACATGTGGGACCACCCACTTACGGCAAAACATGTC 2847350 Query 89409 GATACTCTTAAACATATGGGTTAT 89432 | ||| | ||| | |||||||| Sbjct 2847349 AAAACTTTAAAAGAGTTGGGTTAT 2847326 >seq6011 Length=2428782 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 32862 ATACATGTTATAATGTATAGTTATTACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAA 32921 || ||||| |||||||| |||||||||||| | || | |||||| | ||||||| Sbjct 65086 ATTCATGTCGTAATGTATTTATATTACGGATTAGCTGCCTTCGGTCCTCACATGCGAAAG 65145 Query 32922 TATCTATGGTGGAAAAAATATTTAACTATC 32951 ||| ||||||||||||| ||||||||| || Sbjct 65146 TATTTATGGTGGAAAAAGTATTTAACTCTC 65175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603056145147920