Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4472 136 2e-27 seq13703 84.2 1e-11 seq11726 82.4 5e-11 >seq4472 Length=7509737 Score = 136 bits (150), Expect = 2e-27 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||||||||| ||||||||| || |||||||||||||| |||||| Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | |||||||| |||||||| ||||| || | | || || || || || Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT---AAAATTGTGTCTTCGCTCTCC 34656 | ||| ||||||||| ||| ||| | ||||||| | || | | | || ||||| Sbjct 667927 ATTCCTTCCTTGTCTTGGAT-TTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCT-- 667983 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | || || |||||||| || | ||||| || ||||||||||| Sbjct 667984 ACTTCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | ||| || | ||| | ||| || ||||| |||||||||||||| Sbjct 667579 CCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGAT 667638 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| ||| | |||||||| ||||| |||||||| ||||||||||||||||| || || Sbjct 667639 AATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGA 667698 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||||| || ||| ||| ||| |||| | || ||||| ||| ||| Sbjct 667699 ATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAACT 667758 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || ||||| || ||||| ||||| |||||||| ||||| Sbjct 667759 TCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 129 bits (142), Expect = 4e-25 Identities = 121/153 (79%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | |||||||| |||||| |||||||||||||| || |||||| Sbjct 666130 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAA 666189 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||||| | ||||||||||| || |||||||| || | |||||| || || || || Sbjct 666190 AGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGG 666249 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632 | ||||| |||||| ||| ||||| ||| || Sbjct 666250 ATACCCTCTTTGTCT-TGAATTTTTGCTTTGAC 666281 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| | ||| || || || |||||||||||||||||||| || | ||||| Sbjct 668281 ACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGGCCATCTTCG 668340 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || ||||| |||||||| || ||||| || || | || || |||||| | Sbjct 668341 AGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCTTTGTCTTGG 668400 Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 || || |||| | ||| ||||| | || ||||||| |||||| || || Sbjct 668401 ATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTTATGGTCTTG 668460 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| ||||| |||||||| Sbjct 668461 CCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 107 bits (118), Expect = 1e-18 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 ||| || | ||| || ||| |||||| |||||||| || ||||| |||||||| | || Sbjct 666909 CAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTTCGACCATC 666968 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || || ||||| || || || || | | |||||| || || || | ||| || || || Sbjct 666969 CTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATC 667028 Query 34614 TGTGATCTTTTGTTTTAACGATAA-AATTGTGTCT-TCGCTCTCCACTTCCACGGTTATC 34671 | ||| ||| | ||| ||| | ||| || || | | | || ||||||| ||||| Sbjct 667029 T-TGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGT-TCTACTTCCAAAGTTATT 667086 Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || ||||||||||| |||||||| Sbjct 667087 GTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | || |||||| || || || || |||||||||||||| || ||| Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | |||||||||||||| || ||||| || | ||| || || || || || Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCCAC 34658 | || || |||||| ||| || ||||| | |||||| || | | | || || Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGT-TCAAC 668213 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || || |||| ||||| |||||||||||||| Sbjct 668214 TTCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Score = 104 bits (114), Expect = 1e-17 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||||||||| ||| || ||||| || || ||||| || | ||||| | ||||| Sbjct 667369 ACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCCATCTTCT 667428 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | || ||||| || || || || | ||||| || || || | || ||||| ||| || Sbjct 667429 AACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTTATCT-TG 667487 Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGT--CTTCGCTCTCCACTTCCACGGTTATCGTT 34674 | ||||| ||| || | |||||| | || ||||| ||||| | ||||| || Sbjct 667488 AATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCT--ACTTCTAAAGTTATGGTC 667545 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||||||| |||||||||||||| ||||| Sbjct 667546 TTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 >seq13703 Length=2289824 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || | ||| | || ||||| ||||| ||||||||||||||||||||||| Sbjct 2085161 CCACCCCTCAAACGAAGAACTAAATGAAGAGTAGATTCCTTTTGAATGTTATAATCTGAT 2085220 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || ||||| | ||||| | ||||| |||||||| ||||| | ||||| || || || Sbjct 2085221 AGAGTTCGTCCATCTTCCAACTGTTTGCCGGCAAAAATTAATCTTTGTTGATCAGGGGG 2085279 >seq11726 Length=1646561 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||||||| | | || ||||| | ||| ||| || ||||| || ||||| || Sbjct 660154 CCACCTCTAAGTCTGAGTACTAAATGTAAAGTAGACTCTTTCTGAATATTGTAATCGGAT 660095 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||||||| | ||||| | ||||| || ||||| || || ||||||||||| || || Sbjct 660094 AGTGTTCGCCCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 660035 Query 34600 ACTCC 34604 | ||| Sbjct 660034 ATTCC 660030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314666183264189