Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4472 136 3e-27 seq435 125 6e-24 seq8847 104 2e-17 seq13703 87.8 2e-12 >seq4472 Length=7509737 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| ||||| |||| ||||| | || ||| | ||||| ||||| Sbjct 667121 ATGCAGATATTTGTGAAAACATTGACTGGCAAAACAATAACTTTGGAAGTAGAACCTAGT 667062 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||||||||| |||||||| || || ||||||||| Sbjct 667061 GATACTATTGAAAACGTAAAAGCCAAAATTCAAGATAAAGAAGGAATTCCTCCCGATCAA 667002 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || ||||| | || || || || | || || |||||| Sbjct 667001 CAGAGACTTATTTTCGCTGGAAAACAGCTAGAGGATGGTCGAACACTCTCAGACTACAAC 666942 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | ||| | |||||| | ||||| ||||| || Sbjct 666941 ATTCAGAAGGAGTCCACACTTCATCTTGTTTTGAGGTTGCGTGGTGGTAT 666892 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||||||||| || || ||||||| || ||||| ||||| Sbjct 667349 ATGCAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGT 667290 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| ||||||||||| || ||||| || |||||||||||| Sbjct 667289 GATACCATAGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCCGATCAA 667230 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || | ||||| | ||| | || ||||||||| Sbjct 667229 CAGCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAAC 667170 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || | ||| |||||||| | | || ||||| || Sbjct 667169 ATCCAAAAAGAATCTACACTCCATCTGGTTTTGAGGCTTCGAGGTGGTAT 667120 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| || || ||| | |||||||| ||||| ||||| Sbjct 668261 ATGCAGATTTTTGTTAAAACTCTAACTGGGAAGACAATTACTCTAGAAGTTGAACCAAGT 668202 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| |||||||||||||| || ||||| ||||| Sbjct 668201 GATACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAG 668142 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || || |||||| | ||||| || || |||| || || ||| Sbjct 668141 CAACGTCTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCGGACTATAAC 668082 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | || ||||| || | ||| | ||||| || Sbjct 668081 ATTCAAAAAGAATCTACACTTCACTTGGTGCTGAGGTTGAGAGGTGGTAT 668032 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27015 GGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAA 27074 |||||| | |||||| | ||||| || | | || | ||||| | |||||| |||| Sbjct 666329 GGCAAGACAATTACTTTAGAAGTTGAGCAGAGTGATACTATTGAAAATGTCAAAGCAAAA 666270 Query 27075 ATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAA 27134 |||||||||||||| || || || |||||||| |||||| | || | |||||||| ||| Sbjct 666269 ATTCAAGACAAAGAGGGTATCCCTCCCGATCAGCAGCGTCTCATTTTTGCCGGCAAGCAA 666210 Query 27135 TTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTG 27194 | ||||| | ||| |||| || ||||||||||||||||| || || | |||||| Sbjct 666209 CTTGAAGATGGGCGAACCCTTTCAGACTACAACATTCAAAAGGAATCCACTCTTCATTTG 666150 Query 27195 GTTTTGCGTTTGCGGGGTGGCAT 27217 || | ||| || | || || || Sbjct 666149 GTACTCCGTCTGAGAGGAGGAAT 666127 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| | ||||| ||| | || ||| | ||||| || || Sbjct 667577 ATGCAAATTTTTGTGAAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGAGCCTAGT 667518 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||| || |||||||| || || |||||| Sbjct 667517 GATACAATTGAAAATGTGAAAGCAAAAATTCAAGATAAGGAAGGCATCCCTCCAGATCAA 667458 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || || || || ||||| | || | ||||||||||| Sbjct 667457 CAAAGGTTGATTTTCGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACAAT 667398 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || ||| | ||||||||| | | ||||| ||||| || Sbjct 667397 ATCCAAAAAGAATCCACCCTCCATTTGGTTCTAAGATTGCGTGGTGGTAT 667348 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||||||||| || || || |||||||| | || || ||||| Sbjct 666893 ATGCAGATCTTCGTAAAAACTCTAACAGGGAAAACTATTACTTTAGAGGTTGAACCAAGT 666834 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || ||||| |||||||| || || ||||| ||| Sbjct 666833 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGATAAAGAAGGTATTCCTCCCGACCAA 666774 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||| || || || ||||| | ||| | || || || ||| Sbjct 666773 CAACGTCTGATCTTTGCCGGGAAGCAGTTAGAAGATGGCCGCACCTTATCTGACTATAAC 666714 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || ||||||||||| || |||||| | || ||| Sbjct 666713 ATCCAAAAGGAGTCAACATTACATCTTGTGTTG 666681 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || | || ||||| |||| || || || || || || Sbjct 668717 ATGCAGATTTTTGTTAAGACATTAACTGGCAAAACTATCACACTAGAGGTTGAGCCTAGT 668658 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||||| || ||| ||| || || ||||||||||| || ||||| ||||| Sbjct 668657 GACACGATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGAATTCCACCTGATCAG 668598 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || ||||||||||| || ||| | || || ||||| Sbjct 668597 CAGAGGTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGTACCCTGTCTGACTACAAT 668538 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||| || || || || | || |||||| Sbjct 668537 ATTCAGAAAGAATCTACACTTCACTTGGTT 668508 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||| |||| |||||| | || || | ||||| ||||| Sbjct 668489 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGT 668430 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||| |||||||||||||| || || || || || Sbjct 668429 GACACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAG 668370 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | || ||||| || | ||||| | || |||| ||||| ||| Sbjct 668369 CAACGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTTCAGATTATAAC 668310 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || || || || || || |||||||| Sbjct 668309 ATACAGAAAGAATCAACTTTGCATTTGGT 668281 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| | || || || | || || | ||||| || || Sbjct 667805 ATGCAAATTTTTGTCAAAACTTTAACTGGAAAAACCATCACATTAGAAGTTGAGCCTAGT 667746 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || |||||| ||||| ||||| || || ||||| || ||| Sbjct 667745 GACACCATAGAAAATGTAAAGGCAAAAATCCAAGATAAAGAGGGTATTCCACCTGACCAA 667686 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||||||||| | ||||||||||| | ||||| | || | || ||||| ||| Sbjct 667685 CAGCGTTTAATTTTTGCCGGCAAACAGCTTGAAGATGGGCGTACATTATCAGATTATAAC 667626 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || ||||| || || || || ||| | || ||| Sbjct 667625 ATCCAAAAAGAATCTACTTTGCATCTTGTATTG 667593 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || || |||| || | ||||| || || Sbjct 668033 ATGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGT 667974 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || ||| ||||| |||||||| ||||| || || || ||||| Sbjct 667973 GATACTATTGAGAACGTTAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAG 667914 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || ||||| | ||||| || || |||| || || ||| Sbjct 667913 CAAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAAC 667854 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | || ||||| ||| | || | ||||| || Sbjct 667853 ATTCAAAAAGAATCCACTCTCCACTTGGTGTTGAGGTTAAGAGGTGGTAT 667804 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || ||||| || || || |||| ||| | || || || || Sbjct 666666 CATGCAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAG 666607 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | |||||| ||||||||||| |||||||| || || || ||||| Sbjct 666606 TGACACAATAGAAAACGTCAAAGCTAAAATTCAAGATAAAGAAGGAATCCCCCCAGATCA 666547 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACA 27165 || | | || | ||||| |||||| | ||||| | |||| | || || || |||| Sbjct 666546 GCAAAGGCTTATTTTTGCCGGAAAACAACTAGAAGA-TGGTCGAACATTGTCAGACTACA 666488 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || || || || || | ||| | || || | |||| || || || Sbjct 666487 ACATACAGAAAGAATCCACACTTCATCTTGTCCTGAGGCTGCGTGGAGGAAT 666436 >seq435 Length=3082058 Score = 125 bits (138), Expect = 6e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| ||||| || || | || ||||||||||| || |||| Sbjct 740825 ATGCATATTTTTGTAAAAACCCTGACTGGAAAAACAATAACTCTTGAAGTAGAGTCGTCT 740766 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | || || ||||||||||||||||| ||||||| || || || |||||| Sbjct 740765 GACACCATCAATATTGTGAAACAAAAAATTCAAGATGAAGAAGGAATTCCTCCAGATCAA 740706 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | |||| || || || || ||||| |||| || | || ||||| || Sbjct 740705 CAAAGGCTGATATTTGCGGGTAAGCAGTTGGATGACAAACGCACTCTATCAGATTATGAC 740646 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTG 27206 |||||||| || || || | || |||| | |||||| Sbjct 740645 ATTCAAAAAGAATCAACGCTTCACATGGTGCTACGTTTG 740607 >seq8847 Length=10843265 Score = 104 bits (114), Expect = 2e-17 Identities = 114/149 (77%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 135505 AGAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGG-T 135563 |||||| |||||||| || ||| | ||||||||||||||||| || ||| |||||||| Sbjct 8080907 AGAAGGGAAAATGCATGGTTTTCTTCGCATGTATTGGGCAAAGAAAATACTGGAATGGAC 8080848 Query 135564 CTGCATCGCCTGCAGAGGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAG 135623 | || | |||| || || || || || |||| ||||||||| | |||| ||||| Sbjct 8080847 CAACAGC-CCTGAGGAAGCATTAGAATTTGCTATATATTTTAATGACAAATACAATTTAG 8080789 Query 135624 ATGGACGCGATTCAAATGGCTACGTAGGT 135652 |||| || ||| | |||||||| || ||| Sbjct 8080788 ATGGTCGTGATCCTAATGGCTATGTTGGT 8080760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 135647 GTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTG 135706 |||||||| ||||||||||| || || || || |||| || ||| || ||| |||| Sbjct 8059993 GTAGGTTGCATGTGGTCTATCTGTGGAGTTCATGATCGAGCTTGGGGAGAACGCCCAGTG 8059934 Query 135707 TTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAATTTG 135766 ||||| || || |||| ||||||| | | || || |||||||||| |||| ||| Sbjct 8059933 TTTGGTAAAATACGCTTCATGAACTTTAAAGGCTGCCAAAGAAAATTTGATGTGAATGGA 8059874 Query 135767 TACGTGAGAAAATATA 135782 ||| | | |||||||| Sbjct 8059873 TACATAAAAAAATATA 8059858 >seq13703 Length=2289824 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148 ||| || || || |||||||| | ||||| | ||||||||||| |||||||| | Sbjct 2085286 AGGTATTCCCCCTGATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACG 2085227 Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCG 27208 || | || ||||| |||||||||||||| || || | ||||| ||| | |||||| | Sbjct 2085226 AACTCTATCAGATTATAACATTCAAAAGGAATCTACTCTTCATTTAGTTCTTCGTTTGAG 2085167 Query 27209 GGGTGG 27214 |||||| Sbjct 2085166 GGGTGG 2085161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434828518676160