Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq4472 147 5e-30 seq435 138 3e-27 >seq4472 Length=7509737 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 ||||| || | || ||||| |||||||||||||| || | | ||| | |||||||| Sbjct 666685 ACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGGCCATCTTCT 666744 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | |||||| || || ||||| || ||||||||||| ||||||| ||||| || || ||| Sbjct 666745 AACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCTTCTTTATCTTGG 666804 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| ||| || ||||| || |||||| ||||||||| | ||| || || || Sbjct 666805 ATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTAATAGTTTTC 666864 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || | |||||| Sbjct 666865 CCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | |||||| || || ||||| || || || || || | ||||| | || Sbjct 668502 TCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGACAGGGTACGACC 668561 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || |||||||| | | || || ||||| |||| |||||| || Sbjct 668562 ATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGAATTCCTTCTTT 668621 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||||||||||| |||||| || || || |||||| |||||||| || ||||| Sbjct 668622 GTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACCTCTAGTGTGAT 668681 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || | ||||| ||||| | ||||||||| Sbjct 668682 AGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATTTT 668720 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | || | ||| || ||||| || ||||||||||| | ||| || | Sbjct 668272 AGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGG 668331 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| ||||||||||| || || || | ||||| |||||||| |||| ||||| Sbjct 668332 CCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCT 668391 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| ||||| || || || ||||| ||||||||| | |||||| || | || Sbjct 668392 TTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTT 668451 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | ||| || ||||| | |||||| Sbjct 668452 ATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| || | || || || || || || |||||||||||||| ||||| | ||||| Sbjct 667129 CGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAGAGGGTT 667188 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||| |||||||| || || || || || || ||||| || || |||| ||| Sbjct 667189 CGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATACCT 667248 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| || || || || |||||| ||||| ||||| ||| |||||| || || Sbjct 667249 TCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACTTCTAGT 667308 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || ||||| || ||||| | ||||| Sbjct 667309 GTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| |||||||| |||||||| |||||||| || | ||| || | |||||||| ||||| Sbjct 667830 GTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCATCTTCAAGCTG 667889 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || ||||| |||||||| | ||| || |||||||||| |||||||||||| ||||| || Sbjct 667890 TTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGGATTTT 667949 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| ||||| || || || ||| || || || | ||||| || || || || Sbjct 667950 GGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGATAGTTTTACCAGT 668009 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | |||||| Sbjct 668010 AAGTGTTTTGACGAAAATCTGCAT 668033 Score = 127 bits (140), Expect = 5e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | |||||| || | || || ||||| ||||||||||| || ||||| | | || Sbjct 667356 ACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGT 667415 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 ||||||||||| | |||||| || ||||| || | | |||||| || ||||| | || Sbjct 667416 TCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCC 667475 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| || || || ||| |||||| ||||| || || ||| || || || | Sbjct 667476 TTCCTTATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAA 667535 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| || |||||||| || | ||| || ||||| | |||||| Sbjct 667536 AGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 ||||| || | ||| || |||||||||||||||||||| | | || | |||||||| Sbjct 667597 ACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGATAATGTACGCCCATCTTCA 667656 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 ||||| ||||| || || || | || ||||||||||| |||| || || || || ||| Sbjct 667657 AGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGAATACCCTCTTTATCTTGG 667716 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 || ||| || || ||||| ||||||||| ||||| || | ||||| || ||| Sbjct 667717 ATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAACTTCTAATGTGATGGTTTTT 667776 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | ||| || ||||| | ||||| Sbjct 667777 CCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 102 bits (112), Expect = 2e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||||||||| || ||||| ||||| || || | |||||| | |||||||| || ||| Sbjct 666154 TGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTTCGCCCATCTTCAAGTTGC 666213 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || || || || || || || || ||||| | || || ||||| || || ||| Sbjct 666214 TTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGGATACCCTCTTTGTCTTGAATTTTT 666273 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 ||| || ||||| || || ||| ||||| || | ||| || ||||| || Sbjct 666274 GCTTTGACATTTTCAATAGTATCACTCTGCTCAACTTCTAAAGTAATTGTCTTGCC 666329 >seq435 Length=3082058 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210902 TAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATC 210961 ||| || | |||||| || || |||||||| |||| |||||| | || || | | || Sbjct 740613 TAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGAGTGCGTTTGTC 740672 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 |||| |||||| || || || || || | |||||| || ||||||| |||||| | || Sbjct 740673 ATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATTCCTTCTTCATC 740732 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 || || ||||||||||| | | |||||||||||| || || || ||||| || || Sbjct 740733 TTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCAAGAGTTATTGT 740792 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || || |||||||| | |||||||| Sbjct 740793 TTTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158906457918545