Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq4472 163 7e-35 seq435 91.5 4e-13 seq11726 87.8 4e-12 >seq4472 Length=7509737 Score = 163 bits (180), Expect = 7e-35 Identities = 172/224 (77%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||| || || | ||||| |||||||||||||||| ||||||||||| ||| || Sbjct 667356 ACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGT 667415 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| |||||||||| |||||| |||||||| || | | |||||| || || || || || Sbjct 667416 TCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCC 667475 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 |||||| ||||| || |||||| |||||| ||| || || || | || || |||| Sbjct 667476 TTCCTTATCTTGAAT-TTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTA 667534 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 | || || ||||| || || |||||||| | || | ||||||| Sbjct 667535 AAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 150 bits (166), Expect = 4e-31 Identities = 168/222 (76%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| |||| || || ||||| || ||||||||||||| |||||||| | | ||| Sbjct 667129 CGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAGAGGGTT 667188 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| |||||||| ||||| || || || || ||||| ||||| ||||||||| Sbjct 667189 CGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGAATACCT 667248 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| || ||| || |||||| ||| ||||| || | ||| || |||| Sbjct 667249 TCCTTATCTTGAAT-TTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACTTCTAG 667307 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || |||| |||||| | || | |||||| Sbjct 667308 TGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || |||| ||||| || | || || || ||||||| || || || | || || | Sbjct 666676 AGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGG 666735 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||||| ||||||||| || ||||| || |||||||||||||| ||||||||||| Sbjct 666736 CCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCTTCT 666795 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||||||||| || ||| ||| || ||||| | ||| || ||||| || Sbjct 666796 TTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTA 666855 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || | |||||||| ||| | ||||| Sbjct 666856 ATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || |||| ||||| || | ||| ||||||||||||| || ||||| | || || | | Sbjct 667588 AGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGATAATGTACGC 667647 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| ||||| || || || || || | || |||||||| || |||||||| || Sbjct 667648 CCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGAATACCCTCT 667707 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || |||||||| ||| ||| ||| ||| |||||||| | || || ||||| ||| Sbjct 667708 TTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAACTTCTAATGTG 667767 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || |||||||| | || | |||||| Sbjct 667768 ATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | || | ||| |||||||| || | || ||||| | | || | Sbjct 668272 AGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGG 668331 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| |||||||| ||||| || || | ||||| ||||| || ||||||||||| Sbjct 668332 CCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCT 668391 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||||||||| || ||| ||| ||| |||||||| || ||| || || || || Sbjct 668392 TTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTT 668451 Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698 || |||||||| ||||||||||| Sbjct 668452 ATGGTCTTGCCAGTCAAAGTTTT 668474 Score = 125 bits (138), Expect = 2e-23 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || ||||||||||| || || ||||||||||| || | ||||| || | ||| || Sbjct 666444 ACGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGACAATGT 666503 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || ||||||||||| || || || || || ||||| | ||| || || || || || || Sbjct 666504 TCGACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCC 666563 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||| || ||||| || ||| || || || ||| || ||||| || || || |||| Sbjct 666564 TTCTTTATCTTGAAT-TTTAGCTTTGACGTTTTCTATTGTGTCACTGGGCTCTACCTCTA 666622 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | ||||| || || || || | ||| || | ||| | |||||| Sbjct 666623 AAGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 116 bits (128), Expect = 9e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 |||| || | ||||||||||||||||||||| | || || || | | ||| | ||| Sbjct 667819 CTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCA 667878 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 ||||| ||||| || || || |||||||| | ||| || || || ||||| ||||||||| Sbjct 667879 TCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTG 667938 Query 225619 TCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||| ||| |||| | | | || || || || | || || ||||| ||||| Sbjct 667939 TCTTGGAT-TTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGAT 667997 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || | ||||| | ||| | ||||| Sbjct 667998 AGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 107 bits (118), Expect = 5e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 ||||| || | ||| || || ||||||||||| | || || || | | ||| | ||| Sbjct 668047 CTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAAAGAGTGCGACCA 668106 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 ||||| || || || ||||| || || || ||||| || || || ||||||||||| ||| Sbjct 668107 TCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGAATACCTTCTTTG 668166 Query 225619 TCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||| ||| || || ||| ||| || || || | ||| || |||| || || Sbjct 668167 TCTTGGAT-TTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACTTCTAGAGTAAT 668225 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || | |||||| Sbjct 668226 TGTCTTCCCAGTTAGAGTTTT 668246 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| || || |||||||| || | |||||| || | || || | || Sbjct 668502 TCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGACAGGGTACGACC 668561 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||||||||| | | || || || || ||||| ||||| || Sbjct 668562 ATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGAATTCCTTCTTT 668621 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| ||||||||| |||||| || || ||||| | || || |||| ||||| Sbjct 668622 GTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACCTCTAGTGTGAT 668681 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||| || || || || | || | |||||||| Sbjct 668682 AGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATTTT 668720 Score = 96.9 bits (106), Expect = 8e-15 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||||||||| ||||| | ||||| || | | |||| ||||||||| || ||| Sbjct 666154 TGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTTCGCCCATCTTCAAGTTGC 666213 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || || || || || || || ||||| || ||||| || |||||||| || ||| Sbjct 666214 TTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGGATACCCTCTTTGTCTTGAAT-TTT 666272 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCC 225686 ||| || ||| ||| || || || || || ||||| || || |||||||| Sbjct 666273 TGCTTTGACATTTTCAATAGTATCACTCTGCTCAACTTCTAAAGTAATTGTCTTGCC 666329 >seq435 Length=3082058 Score = 91.5 bits (100), Expect = 4e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || ||||||||||| | | ||||| | | ||| | || Sbjct 740614 AGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGAGTGCGTTTGTCA 740673 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || || || || || | |||||| || || ||||| ||||| | ||| Sbjct 740674 TCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATTCCTTCTTCATCT 740733 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || ||||| |||||| | ||||||||| || | || || || | || || || Sbjct 740734 TGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCAAGAGTTATTGTT 740793 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || |||| ||||||| || | |||||||| Sbjct 740794 TTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 >seq11726 Length=1646561 Score = 87.8 bits (96), Expect = 4e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| || || | || | ||| || ||||| || | ||||||||||| | |||| Sbjct 660146 AAGTCTGAGTACTAAATGTAAAGTAGACTCTTTCTGAATATTGTAATCGGATAGTGTTCG 660087 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 ||||||||| | ||| || ||||| ||||| | ||| |||||||| || ||||| ||| Sbjct 660086 CCCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCT 660029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192278587233902