Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq435 116 3e-21 seq4472 105 5e-18 >seq435 Length=3082058 Score = 116 bits (128), Expect = 3e-21 Identities = 171/240 (71%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 101003 TTACTATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTG 101062 ||||||| | ||||| ||| | || ||||||||| | ||||||||||||||||| | Sbjct 740592 TTACTATCG--GCCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCA 740649 Query 101063 TAATCGGCCATAGT---TTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGT 101119 ||||| | | ||| |||| || ||||| || || |||||| |||| ||||||||| Sbjct 740650 TAATCTGATAGAGTGCGTTTG---TCATCCAACTGCTTACCCGCAAATATCAGCCTTTGT 740706 Query 101120 TGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCT 101179 || ||| || | ||||||| || |||||||||||||||| | || || Sbjct 740707 TGATCTGGAGGAATTCCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCA 740766 Query 101180 GTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 | ||| | ||| | || || ||||| || |||| ||||| | |||||| |||||| Sbjct 740767 GACGACTCTACTTCAAGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCATT 740826 >seq4472 Length=7509737 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || || |||||||||| |||| || | || ||||||||||| ||||||||||||| | Sbjct 667351 CCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGAC 667410 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | |||||| || || || || || | || | ||||||||| ||| || Sbjct 667411 AATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGG 667470 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | |||||| || || ||||||| |||||||| | | || || | | | | | Sbjct 667471 ATGCCTTCCTTATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACT 667530 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | || || || || || || || ||||| | ||||||||||||| Sbjct 667531 TCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||||| |||| ||| | || |||||||| ||||||||||| || | | Sbjct 668491 CCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAC 668550 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || |||||||||||| || || || | || | ||| || || || || Sbjct 668551 AGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGA 668610 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||||||||| || ||| |||||||| | | ||| || | | | Sbjct 668611 ATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACC 668670 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | || ||||||||||| || ||||| |||| |||||| |||||| Sbjct 668671 TCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATT 668718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409578255013047