Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq546 150 2e-31 seq14474 132 7e-26 seq16166 107 3e-18 >seq546 Length=398126 Score = 150 bits (166), Expect = 2e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 |||| || |||||||| |||||||| || ||||||||||| ||||| | ||| || | Sbjct 243759 CCAAGTTTTCATTTACAATTCCATCGCTTGCAGCAAAAAAGGCTAAGATATGAGAGATGA 243700 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 | | |||||| | || ||||||| | ||||||| | |||||||||| |||||||| Sbjct 243699 AGTGTTTTTCTTCTGATTTCAGTTTTTCCCAGTCAGAAAAGTCTTTTGATAGATCTACTT 243640 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 |||| | ||||| || || ||||||||||| |||||||| | ||| ||||| |||| Sbjct 243639 CTTCTACGGTCCAGAAAGACGCCTCTGCTTTCTTATACATCTGCCACATATCTTGATATT 243580 Query 48703 GGATTGGGAAAATAACAAATCTATTTGGATT 48733 || || || |||||||| ||| ||||| Sbjct 243579 CAATGGGAAAGATAACAAACCTACGGGGATT 243549 Score = 111 bits (122), Expect = 2e-19 Identities = 161/223 (72%), Gaps = 7/223 (3%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| || |||||||| ||| ||||||||||| ||||| || || | || || Sbjct 248754 TCATCTCTGCTGATTAATTCATTACTGAATGTGAGACCAGGCATAAGACCTCTCTTCTTC 248695 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284 | ||| || || | || || || ||||| || ||||||||||| ||||| |||||||| Sbjct 248694 AACCAGAAAATAGATGCAAAGGAGCCAGAGAAAAATATGCCTTCCACGGCTGCAAATGCA 248635 Query 48285 GTAAGTCTCTCTCCGTAACTGGC-TTCGT--TGTGTATCCACCGTT--GTGCCCAATCAG 48339 || ||| ||||| | || ||||| | ||||| ||| | ||||| || | Sbjct 248634 ACAACTCTTTCTCCAAAGGAAGCATTCGTGCTACTGATCCA--GTTCAGCGCCCAGTCCG 248577 Query 48340 CCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382 ||||| | || ||||| |||| ||||| || ||||| || || Sbjct 248576 CCTTCCTTTTAACACAGGGCAAAGTTTCGATCGCATTGAACAG 248534 Score = 91.5 bits (100), Expect = 2e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 48391 TTTCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450 ||||| | | |||||||| || ||||| ||||| | || |||||||| || || | || Sbjct 245626 TTTCAGTTTTGTCTTTAACATATGTATCAATTAACAAGCTGTACATTTCTGAATGGACAT 245567 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTAC 48510 | ||||| || || ||||| || ||||||||||| || ||||| | ||| || || || Sbjct 245566 TCTCAATAGCTATTTGAAAACCATAAAAACATCTGGCCTCTGTAACCTGAACTTCTTGAC 245507 Query 48511 AAAATCGTTC 48520 |||||||| Sbjct 245506 TGAATCGTTC 245497 >seq14474 Length=2471489 Score = 132 bits (146), Expect = 7e-26 Identities = 118/148 (80%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 76843 CCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATAT 76902 ||||| ||| |||||||||||||||||||| | || |||| |||| || || |||| Sbjct 1671505 CCAGATGCCAGCCGTAGAAATGCATGCTTGTGATCTTTCCATAATTAGGTTCAGCAATAT 1671564 Query 76903 GAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAA 76962 | | ||||| ||||| |||||||| ||| |||||||||||||||| |||||||| | | Sbjct 1671565 GCACATTCAAGGACTGGCTTTGATCAATGTAAGCTCCTCTATCAGCAGCCATTTTCAATA 1671624 Query 76963 TGGTCTTTTGAGGAATTTCCCAAATAGT 76990 | | || |||||||||||||| | ||| Sbjct 1671625 TATTTTTCTGAGGAATTTCCCAGACAGT 1671652 Score = 120 bits (132), Expect = 4e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 || ||||| ||||| || ||||| | |||||| |||||||| || || ||||| | ||| Sbjct 1672517 TGGAATTCACCAGATAAGACTCTTCTAGTGTAGATATTACTTGTGTAAGGTTCAATTGAT 1672576 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| ||||| | ||| ||||| || || |||||||||||||| || | || |||||| Sbjct 1672577 TCATTATTTCCAAGAATCTGAGCTGTTGATGCAGTTGGCATAGGCGCTAATAACAAACTA 1672636 Query 77247 TTTCTGAGACCATG 77260 ||||| | |||||| Sbjct 1672637 TTTCTAACACCATG 1672650 Score = 111 bits (122), Expect = 2e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 77363 ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTA 77422 |||||| || || | ||| |||| ||||||||||| || || || ||||| | | Sbjct 1674021 ATATGTCTCGTATGTTCCCAACTTTTCGGCTAGTTCACAGCTAGCCTCTAATGCGGCAAA 1674080 Query 77423 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATA 77482 |||||| ||||| ||||| | ||| || | ||| ||||| ||||||||| ||||| Sbjct 1674081 ATAAATGGTTTCAAAAATGTCTGCATTTAGCTTTTGAGCTTCTTCACTATCAAATGGATA 1674140 Query 77483 ATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCT 77542 | |||||||| ||||| ||||| || |||||||| || ||||| || ||||| | Sbjct 1674141 TCTCATCAGAATAAAAGCATCCGCTAAACCTTGAACTCCTATTCCAATGGGCCTATGACG 1674200 Query 77543 CTTATTGGA 77551 ||||| || Sbjct 1674201 TTTATTTGA 1674209 Score = 107 bits (118), Expect = 3e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 ||| ||| |||||||||| || ||||| ||||| | ||||| |||||| ||||| Sbjct 1696355 ATAAAGCTGTTCAAATTCTTCACCCCAGCAATCATGGAGCCCAGGTGATTCATCAGGGCA 1696414 Query 77975 CATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAG 78034 ||| | ||| |||| | | ||| | | |||||| | |||||||||||| | Sbjct 1696415 CATAAGACTCCACATTTCATCCTTTTCAACCCTCTGCATAAATAAATCAGGTATCCACAA 1696474 Query 78035 AGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAG 78094 ||| ||| | ||||| | | ||||| || || || || |||||||| | ||| || Sbjct 1696475 TGCATAAAACAAATCTCTTGCACGTTGTTCCTCTTTGCCAGTGTTCTTTTTCAAATCAAG 1696534 Query 78095 AAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148 || || | |||||||| |||||| || |||| || || || | | ||||||| Sbjct 1696535 GAAGTCAAAAATATCAGCATGCCAAGGCTCTAAGTAAATAGCAAAAGCTCCAGG 1696588 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 78744 CTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATA 78803 |||||| ||| || ||||| ||||| ||||| || | ||| |||| |||||||||||| Sbjct 1721251 CTAAATGTTTTCTTCGTTTCTTTGTGCAGATTGGAGATAGCAATTCGAGCAGCTAGAATA 1721310 Query 78804 GCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAAC 78863 ||||| || ||||| | |||||| ||| || || ||||| || |||| |||||| Sbjct 1721311 GCATAGTCTGGATGCTTTGTAGTCATAGTAGCAGCAATTTCAGCAGCTAGGTTATCTAGT 1721370 Query 78864 TCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCAT 78907 || | || ||||| ||| ||| | || || |||||||| Sbjct 1721371 TCAACTGTAGTGACACCAGGATACAAGCCACTTATTACTTTCAT 1721414 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 ||||| | ||| || | ||| || || |||||||| |||||||| || || | || || Sbjct 1702637 GTTCCAGAATTGAAAAGTGTAGGGGAGGCATGCGTGAACCATTTCTCTGACATTAAATGA 1702696 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 ||||||||||| || | || || || |||||| || |||| ||| | ||||||| Sbjct 1702697 TATGTTTCAATGGCAGCATCAATATCATCAGAATGAATACCAACCGATACTCTCATCAAC 1702756 Query 78519 ATATGCTGAGGTCTTTCAAC 78538 |||||||| |||| |||||| Sbjct 1702757 ATATGCTGTGGTCGTTCAAC 1702776 >seq16166 Length=1540 Score = 107 bits (118), Expect = 3e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 ||| ||| |||||||||| || ||||| ||||| | ||||| |||||| ||||| Sbjct 23 ATAAAGCTGTTCAAATTCTTCACCCCAGCAATCATGGAGCCCAGGTGATTCATCAGGGCA 82 Query 77975 CATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAG 78034 ||| | ||| |||| | | ||| | | |||||| | |||||||||||| | Sbjct 83 CATAAGACTCCACATTTCATCCTTTTCAACCCTCTGCATAAATAAATCAGGTATCCACAA 142 Query 78035 AGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAG 78094 ||| ||| | ||||| | | ||||| || || || || |||||||| | ||| || Sbjct 143 TGCATAAAACAAATCTCTTGCACGTTGTTCCTCTTTGCCAGTGTTCTTTTTCAAATCAAG 202 Query 78095 AAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148 || || | |||||||| |||||| || |||| || || || | | ||||||| Sbjct 203 GAAGTCAAAAATATCAGCATGCCAAGGCTCTAAGTAAATAGCAAAAGCTCCAGG 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694525238009120