Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4472 105 5e-18 >seq4472 Length=7509737 Score = 105 bits (116), Expect = 5e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| || |||||||| || || | || ||||||||||||||| || Sbjct 666660 TTGCATGCCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATA 666719 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | ||| | || || | |||||||||||||||||||| ||| || || || Sbjct 666720 GTCAGATAAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTC 666779 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282 | ||| | |||||| || || ||||| |||| || || | || ||||| | Sbjct 666780 GGGAGGAATACCTTCTTTATCTTGGATCTT-GGCTTTAACATTTTCAATAGTGTCACTTG 666838 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| | ||||| || || || || || || || |||||||| ||||| Sbjct 666839 GTTCAACCTCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || ||||| ||||| || || || || ||||||||||||||||| Sbjct 667119 CATACCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATC 667178 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| || | || || |||||||| || ||||| |||| |||||| ||||| | Sbjct 667179 TGAGAGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGG 667238 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||||||| || || || |||| || ||||||| || | ||| Sbjct 667239 TGGAATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTC 667298 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| || ||||| || || || || || || |||||||| Sbjct 667299 AACTTCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||||||| | | |||| ||||| ||| |||||||| |||||||| Sbjct 666123 TTACATTCCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTA 666182 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | || ||| | || || || ||||| |||||||| || | |||||||||||| Sbjct 666183 GTCTGAAAGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATC 666242 Query 44224 TGAAGGCACACCTTCCTTTTC 44244 | ||| | ||| || || || Sbjct 666243 GGGAGGGATACCCTCTTTGTC 666263 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||||||| ||||| || || || | || || ||||||||||| || Sbjct 667572 TTGCATTCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATA 667631 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | | | ||| | || || ||||| || |||||||| || |||||||| || || Sbjct 667632 ATCTGATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTC 667691 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | ||| || || || || || ||| | || |||||||||| | Sbjct 667692 AGGTGGAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGG 667751 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || || ||||| || | || || || || |||||||| Sbjct 667752 CTCAACTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359917863396861