Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4472 165 2e-35 seq435 120 7e-22 >seq4472 Length=7509737 Score = 165 bits (182), Expect = 2e-35 Identities = 168/217 (77%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||||||||| || ||||| ||||||||||| ||||| | ||||| || || ||| Sbjct 666662 CAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGA--GCCCAGTG 666605 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| || || ||||||||| || ||||| || |||||||||||||| || || |||| Sbjct 666604 ACACAATAGAAAACGTCAAAGCTAAAATTCAAGATAAAGAAGGAATCCCCCCAGATCAGC 666545 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 || | ||||| || ||||||||||| || |||||||| | || | | || || ||| Sbjct 666544 AAAGGCTTATTTTTGCCGGAAAACAACTAGAAGATGGTCGAACATTGTCAGACTACAACA 666485 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | || |||||||| ||||| |||||||| |||| || Sbjct 666484 TACAGAAAGAATCCACACTTCATCTTGTCCTGAGGCT 666448 Score = 141 bits (156), Expect = 2e-28 Identities = 161/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || |||||||| ||||| || || || ||||| ||||| | || || || || || Sbjct 668030 CAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGA--GCCTAGTG 667973 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || || |||||||| ||| || || || ||||| |||||||| ||||| || |||| Sbjct 667972 ATACTATTGAGAACGTTAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAGC 667913 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 || | |||||||| || || |||||||| |||||||| | |||||| | || |||||| Sbjct 667912 AAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAACA 667853 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 | ||||||||||| || || || | || ||||| Sbjct 667852 TTCAAAAAGAATCCACTCTCCACTTGGTGTTGAG 667819 Score = 136 bits (150), Expect = 1e-26 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||||| ||||||||||| || || || || || ||| || Sbjct 667346 CAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGTGAT 667287 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || ||||| || || ||||| || || || || || || Sbjct 667286 ACCATAGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCCGATCAACAG 667227 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||||| |||||||| | || || | ||||| ||| || Sbjct 667226 CGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAACATC 667167 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||||||||| ||||| ||||| |||||||| || Sbjct 667166 CAAAAAGAATCTACACTCCATCTGGTTTTGAGGCT 667132 Score = 136 bits (150), Expect = 1e-26 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 |||||||| || |||||| | || |||||||| ||||| | || || || || || Sbjct 667802 CAAATTTTTGTCAAAACTTTAACTGGAAAAACCATCACATTAGAAGTTGA--GCCTAGTG 667745 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| || || || || ||| || || || ||||| || || || || ||||| | Sbjct 667744 ACACCATAGAAAATGTAAAGGCAAAAATCCAAGATAAAGAGGGTATTCCACCTGACCAAC 667685 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | || || ||||| |||||||| |||||||| | || | | ||||||||| Sbjct 667684 AGCGTTTAATTTTTGCCGGCAAACAGCTTGAAGATGGGCGTACATTATCAGATTATAACA 667625 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||||| || |||||||||| ||||| || ||| Sbjct 667624 TCCAAAAAGAATCTACTTTGCATCTTGTATTGAGGCTGAGA 667584 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || |||||||| || || || || || || || || || ||| || Sbjct 668258 CAGATTTTTGTTAAAACTCTAACTGGGAAGACAATTACTCTAGAAGTTGAACCAAGTGAT 668199 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || || ||||||||||| || || || || |||||| Sbjct 668198 ACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAGCAA 668139 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || |||||||| || |||||||| | |||||| | || |||||| | Sbjct 668138 CGTCTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCGGACTATAACATT 668079 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||||||||| ||||| || |||| Sbjct 668078 CAAAAAGAATCTACACTTCA-CTTG 668055 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || |||||| | || || || || || ||| | || || ||| | ||| Sbjct 668486 CAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGTGAC 668427 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || || || || ||||||||||| || || || ||||||||| Sbjct 668426 ACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAGCAA 668367 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || || |||||||||||||| | || ||| | ||||||||| | Sbjct 668366 CGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTTCAGATTATAACATA 668307 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || ||||||||||| ||||| | || | ||||| || Sbjct 668306 CAGAAAGAATCAACTTTGCATTTGGTACTCAGACTAAG 668269 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| | || || ||||| || || | || || ||| || Sbjct 667118 CAGATATTTGTGAAAACATTGACTGGCAAAACAATAACTTTGGAAGTAGAACCTAGTGAT 667059 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || ||||| || ||||||||||| ||||| || || || Sbjct 667058 ACTATTGAAAACGTAAAAGCCAAAATTCAAGATAAAGAAGGAATTCCTCCCGATCAACAG 666999 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| ||||| ||||||||||| || ||||| | || || | || || ||| | Sbjct 666998 AGACTTATTTTCGCTGGAAAACAGCTAGAGGATGGTCGAACACTCTCAGACTACAACATT 666939 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 || || || || ||||| |||||||||||||| Sbjct 666938 CAGAAGGAGTCCACACTTCATCTTGTTTTGAG 666907 Score = 116 bits (128), Expect = 9e-21 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 |||||||| ||||||||| | || ||||| || || || | || || || || || Sbjct 667574 CAAATTTTTGTGAAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGA--GCCTAGTG 667517 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || || || || || ||| ||| ||||| || || ||||| |||||||| || || | Sbjct 667516 ATACAATTGAAAATGTGAAAGCAAAAATTCAAGATAAGGAAGGCATCCCTCCAGATCAAC 667457 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 || | | || ||||| || || ||| | ||||||||||| || | ||||||| || Sbjct 667456 AAAGGTTGATTTTCGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACAATA 667397 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||||||||||||| || || ||| | ||| | ||| Sbjct 667396 TCCAAAAAGAATCCACCCTCCATTTGGTTCTAAGA 667362 Score = 113 bits (124), Expect = 1e-19 Identities = 168/236 (71%), Gaps = 7/236 (3%) Strand=Plus/Minus Query 177909 AAGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAG 177968 || || ||||||| | ||||| || || || | || || ||||| ||||| || ||| Sbjct 668726 AAAGTCAAAATGC---AGATTTTTGTTAAGACATTAACTGGCAAAACTATCACACTAGAG 668670 Query 177969 GTGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAA 178026 || || || || |||| || ||||| || ||| |||||| |||||||||||||||| Sbjct 668669 GTTGA--GCCTAGTGACACGATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGAA 668612 Query 178027 TCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTC 178086 | || || || ||||| | | |||||||| || || || | |||||||| | || | Sbjct 668611 TTCCACCTGATCAGCAGAGGTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGTACCC 668552 Query 178087 TTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | | || || || | || |||||||| ||||| || | ||| | ||| | ||| Sbjct 668551 TGTCTGACTACAATATTCAGAAAGAATCTACACTTCACTTGGTTCTAAGATTGAGA 668496 >seq435 Length=3082058 Score = 120 bits (132), Expect = 7e-22 Identities = 154/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971 || ||||||| | ||||| || ||||| || || |||||||| || || || || || Sbjct 740831 GTGAAAATGC---ATATTTTTGTAAAAACCCTGACTGGAAAAACAATAACTCTTGAAGTA 740775 Query 177972 GAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031 || || ||||||||| | | || |||||||| ||||| || |||||||||| ||| Sbjct 740774 GAGTCGTCTGACACCATCAATATTGTGAAACAAAAAATTCAAGATGAAGAAGGAATTCCT 740715 Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091 || || || ||| | || || || || || || ||| | || || | | ||||| | Sbjct 740714 CCAGATCAACAAAGGCTGATATTTGCGGGTAAGCAGTTGGATGACAAACGCACTCTATCA 740655 Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCA 178123 |||||| || | |||||||||||||| || || Sbjct 740654 GATTATGACATTCAAAAAGAATCAACGCTTCA 740623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203476214748402