Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4472 98.7 9e-16 >seq4472 Length=7509737 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||| ||||| | || |||||| || ||||||||||| || | |||||| | || Sbjct 666682 AACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGGCCATCT 666741 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | |||||| ||||| || ||||| || |||||||| | |||| | || ||| | Sbjct 666742 TCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATAC-CTTCTTTATC 666800 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 || | || |||| ||| | | |||||| || | || ||||| | || || || Sbjct 666801 TTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTAATAGT 666860 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || || || || |||||||| |||||||| Sbjct 666861 TTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || || ||||| || ||| ||||||||||||||| ||||| ||||| || || | || Sbjct 666910 AAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTTCGACCATCC 666969 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || ||||| || || ||||| || || | |||||| || | |||| | || ||| | Sbjct 666970 TCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTC-CTTCTTTATC 667028 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||| |||| ||| | | ||| || || | || || |||| ||||| || Sbjct 667029 TTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACTTCCAAAGTTATTGT 667088 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || |||| || || || || |||||||| Sbjct 667089 TTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| || || ||| || || |||||||||||||| || || ||||| | || Sbjct 667822 AACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCATCT 667881 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || ||||| || || || || || || | || || || | |||| | ||||||| | Sbjct 667882 TCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTGT-C 667940 Query 41771 ATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 || |||| |||| |||| | | ||| || || | ||| || || | || || || Sbjct 667941 TTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGATAGT 668000 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || |||||||||||||| Sbjct 668001 TTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||| ||| || ||| ||||| |||||||| ||||| || ||||| ||| Sbjct 666139 AGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTTCGC 666198 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || || ||||||||||| || || || ||||| || || | || | | ||| Sbjct 666199 CCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAGGGATACCCTCT 666258 Query 41765 TTGTCCATGATTTTTTGCTT 41784 |||| | ||| ||||||||| Sbjct 666259 TTGT-CTTGAATTTTTGCTT 666277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462208459099600