Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq6977 87.8 1e-12 >seq6977 Length=186913 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 25119 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 25178 |||||| ||||| ||||| | || || || || | ||||||||||| |||||| Sbjct 61283 AAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTTATCTTTGCTGGCAAA 61342 Query 25179 CAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238 || |||||||| || || | || |||||||||||||||||||| ||||||||| Sbjct 61343 CAGTTGGAAGACGGTCGTACCCTGTCTGACTACAATATTCAAAAGGAATCCACTCTTCAC 61402 Query 25239 ATGGTGTTACGATTACGAGGAGG 25261 ||||| | || | ||||| || Sbjct 61403 TTGGTGCTGCGTCTTCGAGGCGG 61425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405906892486730