Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 105 1e-17
seq4196 96.9 5e-15
>seq6977
Length=186913
Score = 105 bits (116), Expect = 1e-17
Identities = 166/238 (70%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | || || ||||| || || || || || | || | |||||
Sbjct 61199 ATGCAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCA 61258
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| |||| |||||||||||||| ||||| || || ||||| ||
Sbjct 61259 GACACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAG 61318
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | ||||| ||||| || ||||| || || || |||| || | || || |||
Sbjct 61319 CAGCGTCTTATCTTTGCTGGCAAACAGTTGGAAGACGGTCGTACCCTGTCTGACTACAAT 61378
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||| ||||| ||| | || ||||| | ||| | ||||| || || ||| ||
Sbjct 61379 ATTCAAAAGGAATCCACTCTTCACTTGGTGCTGCGTCTTCGAGGCGGCATGCAAATTT 61436
Score = 96.9 bits (106), Expect = 5e-15
Identities = 164/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | || || || || ||||| || || ||| | || | |||||
Sbjct 62084 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAGACGATTACTCTTGAAGTGGAAGCCTCG 62143
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| ||| | || |||||||| || |||||||| || || || || |||
Sbjct 62144 GATACGATTGAGAATGTGAAGGCTAAAATTCAGGACAAAGAAGGCATTCCCCCCGACCAA 62203
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || || || || || || || | || || | || || || ||| || ||
Sbjct 62204 CAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCCGCACCTTGTCAGACTACAAC 62263
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||||||||| || | || ||||| ||||||| |||||||||| ||| ||
Sbjct 62264 ATTCAAAAAGAATCGACCCTTCACTTGGTGCTACGTTTGAGAGGTGGTATGCAAATTT 62321
Score = 91.5 bits (100), Expect = 2e-13
Identities = 169/247 (68%), Gaps = 1/247 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| || || ||||| || || || | || | |||||
Sbjct 62312 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62371
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | ||| || ||||| || || ||||| || || || || |||
Sbjct 62372 GATACCATCGAAAACGTCAAAGCAAAGATTCAGGACAAGGAAGGCATTCCCCCCGACCAA 62431
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | |||||||| || || || || || || || | || || || || ||||||
Sbjct 62432 CAACGTCTTATTTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAAT 62491
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777
|||||||||||||| || | ||| | || | | | || |||||||| ||| |||
Sbjct 62492 ATTCAAAAAGAATCTACCCTCCATCTTGTCCTCAGGCTTCGTGGTGGTATGCAAATCTTC 62551
Query 124778 ATAAAAA 124784
||||||
Sbjct 62552 GTAAAAA 62558
>seq4196
Length=56364
Score = 96.9 bits (106), Expect = 5e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| |||||| | || || || || || || || || || |||| |||| ||
Sbjct 9693 ATGCAGATATTTGTGAAAACCCTCACGGGTAAGACCATTACCCTAGAAGTTGAGGCTTCA 9752
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | ||| ||||||||||||||||| ||||| |||||||| |||
Sbjct 9753 GATACTATCGAAAATGTCAAATCCAAAATTCAAGATAAAGAGGGTATTCCACCTGACCAA 9812
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACA 124684
|| |||||||||||||| || || ||
Sbjct 9813 CAGAGGCTTATTTTTGCTGGCAAGCA 9838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 746232873776000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |