Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq6977 120 2e-22 >seq6977 Length=186913 Score = 120 bits (132), Expect = 2e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||| ||||| || ||| |||| |||| |||| ||| || ||||| || Sbjct 61617 TCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCCAATTGCTTGCCGGCAAAA 61558 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | ||||| ||||||||||| | || ||||||||| || ||| ||| || Sbjct 61557 ATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTCACATTT 61498 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | ||||| | |||| || |||| |||||| |||||||| || || ||||| || Sbjct 61497 TCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTAACG 61438 Query 45326 AAGATTTGCATGTTGCCTC 45344 || ||||||||| ||||| Sbjct 61437 AAAATTTGCATGCCGCCTC 61419 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| | || |||||||| || || || || |||||||||||||| | Sbjct 62310 CCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAC 62251 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | ||| |||| || || || || |||||||| |||| |||||||||||||| || Sbjct 62250 AAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 62191 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || |||||| |||||| ||| || | | | | ||| | ||||| Sbjct 62190 ATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCACT 62131 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || | |||||||||||||| ||||| || ||||| || || |||||| Sbjct 62130 TCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCATG 62083 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| |||||| || || |||||||| || ||| | || || Sbjct 61863 ACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCATCTTCA 61804 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| || | |||||||||||||| || | ||| ||||| ||| Sbjct 61803 AGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGGGAATACCTTCCTTATCCTGG 61744 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | ||||| | |||| || |||| ||| || ||||| Sbjct 61743 ATCTTTGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGACTTCCAGGGTGATTGTCTTT 61684 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||| || |||||||| Sbjct 61683 CCGGTGAGGGTCTTCACGAAAATTTGCAT 61655 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| |||||| || || |||||||| || ||| | || || Sbjct 62748 ACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCATCTTCA 62689 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| || | ||||| || ||||| || | ||| ||||| ||| Sbjct 62688 AGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGGAATACCTTCCTTATCCTGG 62629 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | | || || || | ||| || |||||| Sbjct 62628 ATCTTTGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTCTTG 62569 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || || ||||||||||| Sbjct 62568 CCAGTGAGTGTTTTTACGAAGATTTGCAT 62540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390372434085595